Typha angustifolia (narrow-leaf cattail): 140778520
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Entry
140778520 CDS
T11061
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140778520
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140778520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
140778520
NCBI-ProteinID:
XP_072979389
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All DBs
Position
15:join(5140565..5140655,5140737..5141136,5141951..5143025)
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AA seq
521 aa
AA seq
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MATTSSSSFLPSSSATPPTAKKKRNLPGNPNPDAEVIALSPRTLLATNRFVCEVCGKGFQ
REQNLQLHRRGHNLPWKLKQKNPKDVVRRRVYLCPEPSCVHHDPSRALGDLTGIKKHYCR
KHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQ
EGARIPAGMSNVTSHLYGTSSMNLGLPQLSSSMASFQDQIQPSADLLRLRGSGVVDHLIS
PGNNPPTFRPPSYYLGGGSSHDFHEDPRQPQHSLLQNKPFHGLMQLPDHLQPNTNNTSST
SNVFNLGFFSHSNSNSSNNGSNQNASHLLIQDQFNSSDGSHTESTTNFSGNLMSDPMGMG
MSSLYNSSVRGESGVQQMSATALLQKAAQMGATTSSGNSLMRGFGSAYSSGAKPIGFSGG
GGGGESSGSQVGEESRFEDLMNSFANGSSSVFYNGSGQEHETGLHHSLTRDFLGVGSMVR
GMGGVVSHREQQQHRGLGIGSLDAEMNFRSCSRSFGSGNLQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacctcctcgtcctcattcctaccgagctcatccgctaccccgcctacggcc
aagaagaagaggaatctccccgggaatccaaatccggacgccgaggtgattgcgctgtca
cctcgaacgctcttggcgacgaatcgcttcgtgtgcgaggtgtgcgggaagggattccag
cgtgagcagaacctgcagctccaccggcgaggccacaacctgccgtggaagttaaagcag
aagaaccccaaggacgtggtgaggcggcgagtctatctctgccccgagccgagctgcgtc
caccacgacccctctcgggccctcggggacctcaccggcatcaagaagcactactgccgc
aagcacggcgagaagaagtggaagtgcgagaagtgctccaagaagtatgcggtgcagtcg
gattggaaggcgcactcgaagacgtgtggcacgagggagtaccgctgcgactgcggcact
cttttctctaggagagacagcttcatcacccatagagctttctgcgatgccttggcgcaa
gaaggcgcgagaattccggccggcatgagcaatgtaaccagccatttatatgggactagc
agcatgaacttgggccttcctcaattgagctcatcaatggcttcctttcaagatcaaatc
cagccgtccgctgacctcctccgtctccgtggcagtggcgtcgtcgatcatctcatctcc
cccgggaacaaccctcccaccttccgcccgccatcctactaccttggaggtggatcaagc
catgacttccatgaagaccctcgtcagcctcagcattccttgctccaaaacaaacccttc
catggcttgatgcagctccctgatcacctccaaccaaataccaacaacacttcgtcaacc
tctaatgttttcaacctgggcttcttctcacacagcaatagcaacagcagcaataatggc
agcaatcagaatgcaagccatctgctgatccaagatcaattcaacagtagtgatggaagt
catactgaatctaccaccaacttctcgggcaatctcatgagtgatcccatgggcatgggg
atgtcttctctatacaacagctcggtgcgtggcgagtcgggcgtgcaacagatgtctgcg
accgcgctgcttcagaaagccgcgcaaatgggcgcgacgactagcagcgggaattctctg
atgagaggattcggaagcgcttactctagtggtgcaaagcccattgggtttagtggtggt
ggcggcggtggagagagctcgggaagtcaagtaggagaagagagccgattcgaagatctc
atgaactcgtttgcgaatgggagtagcagtgtgttctataatggcagtgggcaagaacat
gagactggcttgcaccacagcttgacaagggacttccttggagttggaagcatggtgagg
ggtatgggaggagtggtgtctcatagggagcaacagcagcatcgtggcctcggaataggc
tcgttggacgcggagatgaacttcaggtcttgtagcagatccttcggcagtgggaacttg
caatga
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