Typha angustifolia (narrow-leaf cattail): 140778792
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Entry
140778792 CDS
T11061
Name
(RefSeq) RING-H2 finger protein ATL40-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140778792
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140778792
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
140778792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
PHD
zf-RING_16
TRIQK
Prok-RING_1
zf-RING_4
zf-HC5HC2H_2
Zn_ribbon_IFT122_C
Orf78
zf-RING_10
zf-C3HC4_4
m04gp34like
Adeno_E3_CR2
Prok-RING_4
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
140778792
NCBI-ProteinID:
XP_072979761
LinkDB
All DBs
Position
15:17935412..17936038
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AA seq
208 aa
AA seq
DB search
MSTNVGEQQQQPSYAMDSKVLLTAVITLLSVAIFVILLHLYALYYLRHRRRTTSITTDST
IVFHRSGTGLDREAISALPTFPYKKSSSTTSECAVCLSVLEDGEEVRLLPNCKHTFHVEC
IDMWLHSHPTCPICRSDAEASKVVEEAEVGDVAADMDGASNAKEVASTSRLGSSLRRMLS
GDWSGRRMQPTEGAVEDLERGSSGLISS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaacgtcggggagcagcaacagcaaccgagctacgccatggacagcaaggtc
ttgctcaccgcagtcataaccctcttgtccgtcgccatcttcgtcatcctcctccacctc
tacgccctctactacctccgccaccgccgccgcaccacctctatcaccaccgacagcacc
atcgtcttccatcgctcaggaaccggactcgaccgtgaagccatatcagcgctgcccacg
ttcccatataagaagagcagcagcacgacatcagagtgcgccgtgtgcttgagtgtgttg
gaggatggggaggaggtgaggttgcttcctaactgtaagcatacgttccatgtcgagtgc
atagacatgtggctgcactctcatccgacgtgccctatttgccggtccgacgccgaggca
tccaaggttgtcgaagaggcggaggtgggcgacgtggcggctgacatggacggtgcatcg
aatgcgaaggaggtggcgtcgacgtcgcggttgggctcgtcgttgcggaggatgcttagt
ggggattggtcggggaggaggatgcaaccgaccgagggagcagtagaagatcttgagaga
ggaagtagtggattgattagtagttaa
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integrated database retrieval system
