Typha angustifolia (narrow-leaf cattail): 140778808
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Entry
140778808 CDS
T11061
Name
(RefSeq) protein JOKA2 isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140778808
03029 Mitochondrial biogenesis [BR:
tang03029
]
140778808
Membrane trafficking [BR:
tang04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
140778808
Pexophagy
Other pexophagy associated proteins
140778808
Aggrephagy
Cargo receptors
140778808
Xenophagy
140778808
Other autophagy associated proteins
Midbophagy
140778808
Mitochondrial biogenesis [BR:
tang03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
140778808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
UBA_NBR1_C
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
140778808
NCBI-ProteinID:
XP_072979781
LinkDB
All DBs
Position
3:complement(join(4636740..4636841,4636950..4637462,4637554..4637703,4637798..4638034,4638136..4638235,4638345..4639576,4644864..4644932))
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AA seq
800 aa
AA seq
DB search
MARPMVSFPAMEPQVSPWNLVIKVKYGDILKRFNVYVEGHRLDHNMTTLRTKIINAFKFR
SDVDLTLTYTDEDGDIVILDDDDDLRDAAVCQQLNPLRINVQLKYAGLELEAQTADPTPV
RSVNPENQLVQISSSVDDALKSLPEPFRSTVSNLSHDLFSKVASAAPAFSELMDALSKLN
ISRDSRMPNSVAGDSFGSTSGQMIQPMNMNVNDELVPNNPCPISEQVPSIGSTHQAPEDL
QKQSVTDSMMLGEMVNTPVDLNIEATQNPCASLYPDINDLLSPSWTNNTNVEHKETRDAH
VYGKSVTSATLFSSPADPFMDRNFQTEASGSFLAPSYMYGVADVMGNERTDKNIQLPTGT
ASLIPNQASISRNSFMESNVPSPKVPFLGGNFSIGPPRISGAYCEDMLRTFHRGIRCDGC
GLHPIVGSRYKSIVKENYDLCSICFSQMGNEADYTRIDRVSSFSNRKCPRYRSPSHGYGM
RPKREKLESQFIQDVTILDGSLMAPSTLFTKIWRMRNNGTAQWPYGTQLVWIGGDEFASQ
HSIQLEIPVSGFPVNEEIDIAVDFMAPSRPGRYISYWKLASPSGQKFGQRVWVFIQVDQP
CSSSGGVRSVPNLNLPPVSSAPNETRTIDVNADPLDEFYPEPSTVNISEELVKPLVDDSP
RNILKPSVDEENIPPMPTVQSVVYPIIEFPPSSSTDFPVASVSSPEAASDGNLVEDTLLK
ELEEMGFKQIELNKEILRLNDYNLEQSVDDLCGFAEWGPLLAELQEMGFYDKEKNKKLLV
KYGGSIKRVVLDLIAGEKAE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcccgatggtttcctttccggcgatggagccccaagtcagcccgtggaatttg
gtgattaaggtaaaatatggtgacattcttaagcggtttaatgtttatgtggaaggccat
cgcttggatcacaacatgactacactaagaacaaaaattattaatgcttttaagttcaga
tcagatgttgatcttactcttacctatactgatgaagatggtgacattgtcatactcgat
gatgatgatgatttgcgtgacgctgctgtttgtcagcaattgaatcctcttagaattaat
gttcagttgaaatatgctgggcttgaactagaagctcaaactgcagatcctactccggtg
aggtcagttaatcctgaaaatcagcttgtgcaaataagttcatctgttgatgatgcattg
aaatctctaccagagccatttcgtagtacagtttcaaatctctctcatgatttgttttcc
aaagtagcatcagctgcaccagcattttctgagcttatggatgctctcagtaagttgaat
atatcaagagatagtcggatgcccaactctgtggctggtgattcatttggctcgaccagt
ggtcaaatgatacaaccgatgaatatgaatgttaatgatgagctagttcctaataatcca
tgcccaatatctgagcaagtgccaagcattggatccactcaccaagctccagaagacctg
caaaagcagtctgtaactgatagcatgatgctgggcgagatggtcaatactcctgttgat
cttaatattgaagctactcaaaatccgtgcgcatcattgtatcctgatattaatgattta
ttatctcccagctggacaaacaacactaatgtggagcataaggaaactagggatgctcat
gtttatgggaaatctgtcacatctgccactcttttctcttctcctgctgatccattcatg
gatcgaaattttcagactgaggcatcagggagttttcttgctccaagttatatgtatgga
gttgctgacgtaatgggaaatgaaagaactgataaaaatattcaactgccaacgggtaca
gcatctttgataccgaatcaggcttccatttctcgtaactctttcatggagagcaatgta
ccatcacctaaagttccttttctaggtgggaatttctccattgggccacccaggatttct
ggtgcctactgtgaagacatgctccgaactttccatagagggattagatgtgatggttgt
ggattgcatccaattgtggggtcacgttacaagtccattgtgaaagaaaactatgattta
tgtagcatttgtttttcgcaaatgggtaatgaagctgattatacccggatagacagagtt
tcttccttttccaacagaaagtgtccaagatatcgctctccatcccatggttatggaatg
agacctaagcgagaaaaactagaaagccagttcattcaagatgtgaccatcctagatgga
agtctgatggctccttctactctctttaccaagatttggaggatgcgtaacaatggtact
gcccaatggccttatggtacacaacttgtctggattggcggggatgaattcgcaagtcag
cactccattcagttggagattccagtgagtggcttccctgtgaacgaggagatagatatt
gctgttgattttatggctccatcaaggcctggtaggtacatttcttattggaaattggca
tcaccttctgggcagaaatttggtcaaagagtttgggtttttattcaggtggaccagcca
tgttcttctagtggtggcgtcagatctgttccgaacttgaacctgcctccagtaagcagt
gcaccgaatgagacgaggacaatagatgtaaacgctgatcctttggatgaattttatcca
gagcctagtacggttaacatttcagaggaattggttaagcctttggttgatgactcccca
agaaatatcctgaagccttctgtcgacgaagagaatataccacccatgcctacagttcaa
tcagtagtatatcctattattgaattcccaccatcctcatctactgattttccagttgct
tctgtgtcatcacctgaagcagctagtgatggcaaccttgtggaggatacactgctcaag
gagctcgaggagatgggctttaagcagattgaattgaacaaggagattctcaggctaaat
gattataacttggagcagtctgttgatgatctctgtggctttgctgaatggggtccactt
cttgcggagctgcaggaaatgggtttctatgataaggagaagaacaagaaactgctggtg
aaatatggtgggagcatcaagcgagttgtgctggatcttattgctggagagaaggccgag
tag
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integrated database retrieval system
