Typha angustifolia (narrow-leaf cattail): 140778847
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Entry
140778847 CDS
T11061
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00520
Amino sugar and nucleotide sugar metabolism
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
140778847
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tang01003
]
140778847
Enzymes [BR:
tang01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
140778847
Glycosyltransferases [BR:
tang01003
]
Polysaccharide
Structural polysaccharide
140778847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
140778847
NCBI-ProteinID:
XP_072979832
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All DBs
Position
15:complement(join(22619289..22619564,22619700..22620275,22620478..22620835,22621030..22621304,22622109..22622473,22622639..22622756,22622858..22622899,22623027..22623061,22623172..22623280))
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AA seq
717 aa
AA seq
DB search
MARWRKRRTVLFLLLVSVLAPIVLYTDRLANFSTSILNSDFIDDGSNLSFRNEVGKVNAL
HQESSDAVKEPIWIVHPDSISISDQISDHSAGTTALQAEGEELPLESSGEHKSRVLSAAY
NGTQSESDRVVEQVVGQAGDKQVLEKPKDGEENKETASQKNGDEEPTNSVLSMANDEVQS
ENNGMTEQVVSQGINGMEKADIGETNKDVVLQKIEDPTVSLKQEINNEKPPEPMSNRVRI
RRRKKKPANKLNIGSTTSPDAMVRHLKNQLLRANVYLGLGSTRRNPNFIRDLHARIRDVQ
RALGDSTEDSALPKNAYAKLKAMEQTLSLGKKIEENCSVDMEKLHATLATTEEQLDLNKK
QTLYLMQLAAKALPKGLHCLPLRLTTEYYTSDSSKQQFPHQEKLEDPKLYHYALFSDNIL
AAAVVVNSTVFHAKNPENHVFHIVTDRLNYAAMRMWFLANPLGKAAIQIQNIEEFTWLNS
SYSPVLKQLESQSMIDYYFRAHQAKPDENSKFRNPKYLSILNHLRFYLPEIFPKLNKVLF
LDDDIVVQRDLTALWSIDFKGKVNGAVETCRQSFHRFDRYLNFSNPLISENFDPNACGWA
YGMNIFDLVEWKKQKLTDAYHSWQQLNEGRLLWKLGTLPAGLVTFWNRTLPLDRSWHVLG
LGYDPNVSQRSIERAAVIHYNGNLKPWLEIGLPKYRNYWSKFVDFDQVFLRECNINP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtggaggaagaggaggacggttttgttcttgcttctcgtctcggttcttgcg
ccaatcgttctctacaccgataggcttgccaatttctcgacttctatattaaatagcgac
ttcattgatgacggttcgaatctgagttttagaaacgaggttggcaaggtaaacgctctt
caccaggaatcctctgatgctgtgaaagagcccatctggatagttcaccctgattccatt
agcatttctgatcagatctcagatcactcggctggaacgacagcattgcaagctgaaggt
gaagaattgccacttgagagttctggtgagcacaagagcagggtgctatcggcagcctac
aacggcactcaatcggaaagtgaccgtgttgtagaacaagtggttggtcaggctggtgac
aagcaggtattggagaagcctaaagatggagaagagaacaaggagacggcatcgcagaaa
aacggagatgaagaacccacaaacagtgtattaagcatggccaatgatgaggttcaatca
gaaaacaacggtatgactgagcaagtggtcagccagggcattaatggaatggagaaagct
gacattggtgaaacgaacaaggacgtggtgttgcagaagattgaagatccgactgtttca
ttgaaacaggaaattaataatgaaaaaccacctgaaccaatgtctaatagagttcgtatt
agaaggcgcaagaagaaacccgcaaataaacttaatattggtagtacaacttcacctgat
gccatggtgcgccacctgaagaaccagttgcttagagcaaacgtttatcttggccttgga
tccactagaagaaatcccaactttataagggatctccatgcacggataagggatgttcaa
cgtgcacttggtgactcgacagaggactcggcattaccaaagaatgcctatgctaaactt
aaggcaatggagcagacattgtctctgggcaagaagattgaagagaactgctctgtggac
atggagaaacttcatgcaactctagcaaccacagaggaacaacttgatcttaataagaaa
cagactctttatttgatgcaattagcagcaaaagctctgcccaaaggcctccactgcctt
cctctgcgtcttaccactgaatactatacttcagactccagtaaacagcagtttccacat
caagaaaagttggaagaccctaaactctatcattatgcattgttctcagataacatattg
gcagcagcagtggtcgtcaactccactgtctttcatgctaagaatcctgagaaccacgtc
ttccacattgtaactgatagacttaattatgcagcaatgaggatgtggtttttagctaat
ccactgggcaaagcagctatccagattcagaatattgaagagttcacatggctaaactca
agctacagtccagttctgaagcagcttgaatctcaatcgatgatcgattactattttagg
gctcatcaggctaaacctgacgaaaattcgaagttccgaaacccgaaatatttatccatt
ctaaatcatctccggttttatctacctgagatcttcccaaagcttaacaaggtgctcttt
ttagatgatgatattgtagttcagcgggaccttactgctctttggtcgattgatttcaaa
gggaaggttaacggtgccgtggagacttgccgccagagcttccacagatttgataggtat
ctcaacttctcaaatcctctcatttccgagaattttgaccctaatgcttgcggatgggcg
tacgggatgaatatatttgatctggttgagtggaaaaagcagaaactcacggatgcctat
cactcctggcagcagctgaacgaagggaggctcttatggaaattaggaactctccctgct
ggactagtgacattttggaatcgcactttgcctcttgatcgatcatggcatgtgttgggt
ttaggatacgaccccaacgttagccagaggagtatcgagcgggctgctgtcattcactac
aatggaaatctgaagccttggttggagattggattgccaaagtaccgcaattactggtcg
aaatttgtggattttgatcaagtttttctacgggaatgcaacataaatccttga
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