Typha angustifolia (narrow-leaf cattail): 140779067
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Entry
140779067 CDS
T11061
Name
(RefSeq) cyclin-T1-2-like
KO
K15188
cyclin T
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140779067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140779067
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
140779067
Brd4/P-TEFb complex
140779067
7SK RNP complex
140779067
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
DUF3606
DUF1229
Motif
Other DBs
NCBI-GeneID:
140779067
NCBI-ProteinID:
XP_072980122
LinkDB
All DBs
Position
15:complement(join(13975079..13975644,13975773..13975924,13976026..13976201,13976282..13976416,13978064..13978145,13978963..13979153))
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AA seq
433 aa
AA seq
DB search
MVKDGDTRIADELFSESMRSWYFSQEDIENKSPSRKDGIDLKKESELRLLYCLFIRDVGM
RLKLPQVTIATAVMFCHRFYLHQSHAKNDWQTIATVCIFLASKVEDTPCGLDYVVRVAYE
TIYKKDPVATRRIYQKDVFQKQKALILIGERLLLTTIRFDVKVQHPYKPLFGALKKLGIT
QKDVRQVAWNFVNDWLRTSLCLQYKPHYIAAGSLFLAAKLHNIRLPSERGYVWWHEFDVS
PQQLQAAIQQMTELLGFKRKTVFAHPLGKPIQAPSEAKQQTSGSPDSVLSRPDSLQSSSS
HDLDVEARICGPVDSEKNFGSSWKDDGKHLCGDDTSGLECQPRDSENSTSTTADRRSKQH
VKETSTKPDQVGDKPAKVDIVRIKELIRKRKKHREVSKHMSPVDDSSEDAWIQRALEAGI
ALGDESVSKKQRQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggatggagataccaggatagcagatgagttgtttagtgagagcatgcggtct
tggtattttagtcaagaagatattgagaataaatccccttccaggaaggatggcattgat
ctaaagaaagagtcagaacttcggttgttatactgtttattcattcgagatgttggcatg
aggcttaaattacctcaggtaacgattgcgacagcagtaatgttttgccatcgattttat
ctccatcagtctcatgcaaaaaatgattggcagactattgcaacagtatgcatatttcta
gcttccaaggttgaagacaccccctgtggtttagattatgttgttagagtggcctatgaa
accatttacaaaaaggatcctgttgccactcggagaatttatcagaaggatgtttttcag
aagcagaaagcactaattttgattggggagagattacttctaacaaccattcggtttgat
gtcaaagttcaacacccttacaagccactttttggtgctttaaagaaacttgggattact
caaaaggatgtgagacaagtagcgtggaattttgtgaatgattggcttcggacttcattg
tgcctgcaatataaaccccattacattgctgctgggtcccttttccttgctgctaagctc
cataatatcagacttccttctgagaggggatatgtttggtggcatgaatttgatgttagt
cctcaacagttacaagctgcaatccagcaaatgacagagctacttggctttaaaagaaaa
actgtgtttgctcatcctcttggtaagccaatccaagctccttcggaagcaaaacaacag
acatctggcagtccggactctgttctgagtaggcctgactctctgcaaagcagctcaagc
catgatcttgatgtagaggctaggatttgtgggcctgtcgactccgaaaagaactttggt
agcagctggaaggatgatggcaagcacctctgtggagatgacacttcaggacttgagtgc
caaccaagagacagtgaaaattccacaagtactactgcagataggagatctaagcaacat
gtgaaagaaacaagcacaaagcctgatcaagtgggtgataagcctgctaaagtagatata
gtcagaatcaaggagttgataaggaagaggaaaaagcacagagaagttagtaagcacatg
tctccggtggatgactccagcgaagatgcctggattcagagagctctagaagctgggatt
gctcttggtgatgaatctgttagcaagaaacaaagacaatga
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