| Entry |
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| Name |
(RefSeq) polyadenylate-binding protein 7-like isoform X1
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| KO |
| K13126 | polyadenylate-binding protein |
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| Organism |
tang Typha angustifolia (narrow-leaf cattail)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140779106
09123 Folding, sorting and degradation
03018 RNA degradation
140779106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tang03019]
140779106
03041 Spliceosome [BR:tang03041]
140779106
Messenger RNA biogenesis [BR:tang03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140779106
mRNA cycle factors
Stress granule specific factors
140779106
Spliceosome [BR:tang03041]
Complex C
Other components
Complex C specific factors
140779106
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
15:complement(join(748872..749069,749168..749359,751803..751952,752107..752399,752479..752668,752761..752867,753001..753260,753412..753605,753714..753832,754240..754435))
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| AA seq |
632 aa
MAVASNASTSLPALYVGDLHADVTDTNLFDLFSSAGTVASVRVCRDSVSGRSLGYGYVNF
ISLQDASLAIEKLNYTLLNGKAIRIMWSRRNSDARNSGIGNLFVKNLADAIDNVRLNEAF
GKFGTILSCKVATTQDGRSKGYGFVQFDNQDSANSAIEELNGSVIDGKRIYVGNFVKKSE
RVSPSPEANYTNLYLKNLDEDITEELIHLKFNEFGKIRNVVIAKDTDGNSKCFGFVNFES
PDNAKKAMEAMNGAQLGSKTLYVGRAQKKEERQEILQRLFEEKRNEQIRKNMASNVYVKN
IDDAIDDGALREHFSQCGSITSAKVMRDDKGVSKGFGFVCYSTPEEASKAVKTLHGRMFY
GKPLYVAVAQRKEDRQAILQLQFAQHVAGLAGSSSDIVPSGYPALYYSGPGGVSQAPTHQ
GLTYQSVGPKPQWRANDFVPPSMPAFQQINLPVLPGAQRQHKQSRGRANRHMLPQSGPSS
LHIPHLQHSNRSLDSLNNSSDLQRSGHSKYAGEVRRHEIKNESVVPSAASDLQGVEMLGS
TLAAAATRQQQKQILGERLFPLVQKQKPDSAAKITGMLLEMDNSELLLLLESPKSLTAKV
EEAVQVLKLSNMKISGQETSHGKYLSSEVSVN |
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| NT seq |
1899 nt +upstreamnt +downstreamnt
atggcggtggcttcgaatgcttcgacctcgctcccggcgttgtacgtaggagacctccac
gccgacgtgacggatacgaatctattcgatctcttctcgtcggccggaaccgtcgcatcc
gtccgcgtctgccgcgactccgtctctggccgatctctcggatacggctacgtcaacttc
atctcgctgcaagatgcctcgcttgctatcgagaagttaaactacaccttattgaatggt
aaggctattcggattatgtggtcacgtcgaaattccgatgcaaggaatagtgggattggc
aacctttttgtgaagaatctggctgatgccatagataatgtgaggcttaatgaagctttt
gggaagtttgggaccattttatcttgcaaagttgctactacacaagatggaaggagtaaa
ggttatggttttgttcagtttgataaccaagattctgcaaactctgccatagaagaactc
aatggctcagtcattgatggcaagagaatatatgttggtaattttgttaaaaagagtgag
cgagtttcacccagtcctgaagccaattatactaacctatacttgaagaacctggatgag
gacataacagaagaacttatccacctgaaattcaatgaatttggcaaaataagaaacgtc
gtcattgcaaaagatactgatggaaactcaaagtgttttggatttgttaatttcgaaagc
cctgataatgcaaaaaaggcaatggaggcaatgaacggagctcaacttggttcaaaaact
ctatatgtcggaagggcacagaagaaggaagaacgccaagaaattttacagcgtttattt
gaggaaaagcgcaatgagcagatcaggaaaaacatggcctctaatgtatatgtcaaaaat
attgatgatgccattgatgatggtgctctgagggagcactttagccagtgtggtagtatc
acttctgcaaaagtcatgcgtgatgacaaaggggtgagcaaaggttttgggtttgtatgc
tatagtacaccagaagaagccagcaaagctgtgaagactctgcatgggcgcatgttttat
gggaagcctctgtacgttgcagttgcccaaaggaaggaggataggcaagctatcttgcag
cttcagtttgctcaacatgtggcaggcttagcaggatcttcatctgatattgttccttcc
ggatatcctgctctttattactctggtcctggtggtgtctcacaagctcctacccatcag
ggtctgacatatcagtccgtagggcctaagccgcaatggagagccaatgattttgttcct
ccatcaatgccagcttttcaacaaattaatcttccagttcttccaggtgctcagaggcag
cataaacaaagtcggggccgtgcaaataggcatatgctacctcaatctggcccttcttct
ttgcacattccacatttacagcattcaaatagatctctggattcattaaataactccagc
gatttgcagcgctcaggacattcaaaatatgcgggggaagtgcgccggcatgagataaag
aacgaatctgttgtcccatctgctgcttcagacttgcaaggggtggagatgctcggtagc
acacttgcagctgctgctactcggcaacaacaaaagcaaatccttggcgagcgcctcttc
cctcttgttcagaagcaaaagcccgattctgctgctaaaatcactggcatgcttttggag
atggataactctgaattactgctgcttctggagtccccgaaatcactgactgcgaaagtg
gaagaagcagtccaagttcttaagctgtcgaatatgaaaataagtggtcaagagacttcc
catggcaagtacttgtcatctgaggtttctgtcaactga |
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