Typha angustifolia (narrow-leaf cattail): 140779165
Help
Entry
140779165 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140779165
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
140779165
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
140779165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
IBR_1
RING_XB3-XBAT31
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
140779165
NCBI-ProteinID:
XP_072980249
LinkDB
All DBs
Position
15:join(19667389..19667740,19667829..19668435,19668528..19668606)
Genome browser
AA seq
345 aa
AA seq
DB search
MEEGDSDRIIVIDDDDKVCEIFDDEMLAEELQLQEVIMSSTKRFATLYDINEEVVPQMEV
VQETKCDHLFCNVCLTEYIDLELKKDIRMVKCPHESCRGVLEPKAHREIVSQKPKQKARP
VQKIEKGECSKSTNDDFYCNICMESHPMGESFAIASCGHVFCASCVAQYVSAKVEDNVVS
ITCPDPDCKVGAVDPEMCRDILPGAVFHRWGSALCESSLGSKKFYCPYNDCSALLVDEGD
AATTITDAECPHCNRMFCARCRVAWHDGIGCEEFEKLGEDERGTEDLMLRKLAADKKWQR
CPQCKMFVEKIDGCMFMSCRCGYCFCYVCASPMSKEYHYCTVCNR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcgactccgatcgcataatcgtcatcgacgacgacgacaaagtctgcgag
atcttcgatgacgagatgctggccgaagagctgcagctccaagaggtcatcatgtcttcc
accaagagattcgccactttgtatgacattaacgaagaggtcgttccacaaatggaggta
gtccaagaaaccaagtgtgatcacctcttctgcaacgtatgtttgaccgaatacatagac
ttagagctcaagaaggacattcgaatggttaaatgcccccatgagagttgcaggggagtt
ctcgagcccaaagctcatcgagagatcgtttcgcagaagcccaaacagaaagcaagacct
gttcaaaagatagagaaaggtgaatgctccaaatccaccaacgacgacttctactgcaac
atctgcatggaatcgcatcccatgggcgagtccttcgccatcgcgtcgtgcggccacgtc
ttctgcgccagctgcgtggcgcagtacgtctcggctaaggtggaggacaacgtggtgtcc
atcacgtgccccgaccctgactgcaaagtcggcgccgtggacccggagatgtgccgggac
atccttcccggcgccgtgttccacaggtgggggtcggcgctgtgcgagtcgtccctgggt
tccaagaagttctactgcccgtacaatgactgctccgcgttgctggtggacgaaggggac
gcggcgacgacgataaccgatgcggagtgccctcattgcaaccggatgttctgcgcccgg
tgtagggtggcgtggcacgacgggattgggtgcgaggagttcgagaagctcggggaggat
gagagggggacggaggatctcatgctgcggaagctggcggcggataagaagtggcaaagg
tgtcctcagtgcaagatgttcgtggagaagatcgatgggtgtatgtttatgagctgcagg
tgtgggtattgcttctgctacgtttgtgcgtctccgatgtcgaaggaataccattactgt
acagtgtgtaaccgctaa
DBGET
integrated database retrieval system
