Typha angustifolia (narrow-leaf cattail): 140779406
Help
Entry
140779406 CDS
T11061
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140779406
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140779406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
NDT80_PhoG
Motif
Other DBs
NCBI-GeneID:
140779406
NCBI-ProteinID:
XP_072980547
LinkDB
All DBs
Position
15:complement(join(16232911..16233102,16233177..16233236,16233314..16233472,16236089..16236236,16236321..16236720,16236878..16237040))
Genome browser
AA seq
373 aa
AA seq
DB search
MATVNPFDLLGDDDNDDPSHLIALQQQKIAARKPEVAPPVAAKLPSKPLPPQQSVREARS
NAAPGRGGAGRGVAPRGRGGRGGTSRSFANADANGFSGSYGTAGGAGAEDLDAGKSSERE
RGGYGSQRGSYRGGRRGGYENGEAGGDSERPQRRTYERRSGTGRGYEVKRDGAGRGNWGT
TTDDVFAQVTDENVQIDELTVNPEKLPEKEDGLSNEVNKDNKEGQENEKEEKEPEDKEMT
LEEYEKVKEEKRKALLAMKTEERKVDFDKDFESMKQLSIKKGNDEVFIKLSSEKDIGKKR
DNEREERAKKSLSINEFLKPAEGERFYNPSGRGRGRGRGDRGSFRGGFGSGRMNTYSAPS
IEDPGQFPTLGGK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtaaaccccttcgaccttcttggagatgacgacaacgatgatccctcgcat
ctgattgctttgcagcagcaaaagatcgcggccaggaagcccgaagtcgcgcctccggtg
gcggcgaagctgccctcgaagccccttcctcctcaacaatctgtgagggaggcacggagt
aatgctgctccgggacgaggtggtgctggccgaggcgtggctccacgtggtaggggtgga
cgaggaggtacaagtaggagttttgcgaatgcggatgctaatggcttttctggaagttat
ggtaccgccggtggggctggtgctgaagatttagatgctgggaagtcgtctgagagggaa
cgtggaggttatggctctcaaaggggctcttaccgtggtggccgccgaggtggctacgag
aatggagaggctggaggtgattctgaacgcccgcaacggaggacgtacgagaggcgcagt
ggaactggccgtggatatgaagttaagcgtgacggagcaggaaggggcaactggggtacc
acaacagatgatgtttttgcacaggtaactgatgaaaatgtgcaaattgatgagttgact
gtaaatcctgagaagctgccagagaaggaagatgggctgtcaaatgaagtgaataaggat
aacaaagaaggccaagaaaatgagaaagaagagaaggaacctgaggataaggaaatgact
ctcgaggagtacgaaaaagtaaaagaggaaaaacgaaaagcattacttgcaatgaaaacc
gaggagaggaaggtggactttgacaaggactttgaatccatgaagcagctttctatcaag
aaaggaaatgatgaagtctttatcaagctgagttctgaaaaggatattgggaagaaaaga
gataatgaacgggaagaacgtgccaaaaagtctctgagtatcaacgagtttctgaagcct
gctgaaggagaaaggttttataatccgagtggccgtggccgtggtaggggtcgaggtgat
cggggatcattcagaggtggttttggcagtgggagaatgaacacctactctgccccttca
attgaggatcctgggcaattccccactcttggtggaaagtag
DBGET
integrated database retrieval system
