KEGG   Typha angustifolia (narrow-leaf cattail): 140779419
Entry
140779419         CDS       T11061                                 
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
  KO
K03255  protein TIF31
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tang03012]
    140779419
Translation factors [BR:tang03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    140779419
SSDB
Motif
Pfam: TPR_12 TPR_10 eIF3_p135 TPR_NPHP3 CLU_N TPR_2 TPR_9 TPR_MalT TPR_8 CLU PAM2
Other DBs
NCBI-GeneID: 140779419
NCBI-ProteinID: XP_072980573
LinkDB
Position
15:complement(join(16773429..16775444,16775541..16775622,16775908..16776020,16776111..16776242,16776443..16776626,16777901..16778034,16778306..16778410,16778524..16778625,16778706..16778798,16778906..16779223,16779393..16779494,16779598..16779660,16779976..16780483,16780768..16780928,16781020..16781553,16781773..16781814,16781897..16782028,16782109..16782173,16782277..16782654,16783135..16783207,16783286..16783378,16783476..16783537,16783662..16783731))
AA seq 1853 aa
MAPKAGKAKPHKAKGEKKKKEEKVLPTVVDVTVETPDYTHLTLKGISTDRILDIRKLLAV
HVDTCHITNYSLSHEVRGSKLKDTVEIISLKPCHLTIVEDEYTEELAVAHIRRLLDIVAC
TTSFGSSPAKNAGGNSPAVPPSPAGGGKGDSQSGSLPPSIDSPCGEAPDPTPNSKNTGTA
KPGSPTNSTTASVGANHKDEPMYPPPKLGQFYDFFSFSHLSPPLNYIRRSSRPFVEDKRE
DDFFQIDVRVCNGKPVTVVACRSGFYPAGRRTLLMHSLVDLLQQISRAFDGAYKSLMKAF
IEHNKFGNLPYGFRANTWVVPPIVADLPSVFPLLPTEDESWGGNGGGQGRDGKNDHRPWA
KEFAILAAMPCKTAEERQVRDRKAFLLHCLFVDVAVLKAVDVIQQLVGSHSILDDMSNGL
SDAILRKEQFGDLRITVTRDKSDASTKLDIKLDGSQTLGLSTDELARRNLLKGITADESA
TVHDIATLAVVVVRHCGCTAVVQVPVDAGLLGSPPNHQDIEIEDQPEGGSNALNVNSLRT
LLHKSSTQSSSGIQRPQNTEIEDLQSTTSSVRKILGDSLLKLQAEDTKQSMSIRWELGAC
WVQHLQNQASGKIEPNKTEDTKVEPTVKGLGKQFGQLKEIKKKIDEKSDKTDLARENSAL
DAVNTSKTQLADGTNVKEDKEMVLQKLLPEAAFLRLKESDTGLHVKTPDELIKMAHKYYE
DTALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMSSLGRVVELADKLPHVQSLCIHEMV
VRAFKHILQAVIAAIENKNDMAGPIASCLNILLGSLPAENDDINLNYDNNLKKKWLEIFL
DKRFGWRWNEESLDLRKYAILRGLCHKVGLELVPRDYDMDNSHPFRKSDIISMVPVYKHV
ACSSADGRTLLESSKTSLDKGKLEDAVNYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLY
HTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYL
LHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHA
IAIALSLMEAYSLSVQHEQTTLRILQAKLGLEDLRTQDAAAWLEYFESKAVEQQEAARNG
TPKPDASIASKGHLSVSDLLDYINPDAEIKAREIQKKQARAKIKGSVGQNKWETGDDEDH
RDVVPNQDYARTENSNDKENSTTAQPVESKDEKPDVTVTHVSLNPQDDFTEEDTSDEGWQ
EAVPKGRYQGGRKSGASVRRPSLAKINTNSLSTSDNGRYKGRPPASFPSPRVSPNETVHA
DAISPIAKKLVKSSTFGPKQNANAVSSNSTEKSTTTSKSAPASPSVTALAAKSVSSTIPI
NVQSTRKSLSYKEVALAAPGTIVKAIEDQLMKEKDSDEKETDITKEPASVEQISGEQVFV
DHEGQKKAQEASEADILTSCSKETNDHAHEKKDVEITKKKVLETSPECEDVDSQSLSLEG
SESSDKLLEDHGRISKEIETSTVNCKAVTPLSEESSESPEVGSCAATDCRDLSSSLEPKI
DASASTEDEKDVRNEMPEQLSSGGKIEKSPLMECKKDGTETAKESSSRLSAAAAPFSPST
IPAFGSVAIPGFKEHSGLLPPPVNIPPMLTIPVRKHPHQSATARVPYGPRLAGGYNRSGN
RGPRNKPVVQNAEILPADGNSFSQKVMNPNAAEFVPCQPWIPNGYPLSSEFPSSPNGAPL
SPHSFPPSPNSMVISPTPVSSEVSENNEVSTGGNNSSNLDVVEVENDNQNVDSEQSIEGK
VVTVEAEQSTTQQTPSEDLMVAGEAADTLVVTEKAKCWADYSDGEAEVVEVIS
NT seq 5562 nt   +upstreamnt  +downstreamnt
atggctcccaaggcagggaaagccaagcctcacaaggccaagggcgagaagaagaagaag
gaagagaaagttttgccgaccgttgtcgacgttaccgttgagacccccgactacacccac
ctcacgctcaaggggatatcaacggaccggattctcgacatccgcaagcttctagccgta
cacgtggacacatgccacatcaccaactactccctgtcccacgaggtacgaggaagtaag
ctgaaggatacggtggagatcatctctttaaagccgtgccatctcaccatcgttgaagat
gaatacaccgaagagctcgctgtcgctcacatccgccgcctcctcgacatcgtcgcttgc
actacttccttcggctcttctccggcgaagaatgccggaggtaattcacctgcggtgccg
ccttctccggccggaggagggaagggcgactcgcagtccggttctcttcctccttccatc
gactccccctgtggtgaagcacccgatcccactccaaattccaagaatacagggaccgca
aagcccgggtccccgacaaactccaccacggcatccgtcggcgcgaatcacaaagatgag
ccgatgtaccctccgcccaagctcggacagttctacgacttcttctccttttctcacctc
tcgccacctctaaattatataaggaggtcgtctcggccgttcgtcgaggacaaaagagag
gatgatttcttccagattgatgtgagagtttgcaatggaaagccggtgactgttgtggca
tgtcgaagtggattttatccggcaggaaggaggacgcttctcatgcattccctagtggat
ctattgcagcaaattagccgggcatttgatggcgcatacaagtccctcatgaaagctttt
attgaacacaataagtttgggaatcttccttatggatttcgggcaaacacatgggtggtt
cccccaattgttgctgacttgccatcagtttttcccctacttcccactgaggatgaatct
tggggtggcaatggtggtggtcagggaagagatggaaagaacgatcacagaccatgggca
aaagaatttgcaattttggctgctatgccatgcaaaacagctgaggagagacaagtccga
gataggaaggcattccttcttcactgcctatttgtcgatgtcgctgtcctcaaagctgtt
gatgttattcaacagcttgttggcagtcatagtatcttagatgacatgtcaaatggtttg
tctgatgcaattttgcgcaaggaacaatttggagatttaagaattacagttacaagagac
aaatccgatgcaagtactaagttggacatcaaattggatggaagtcagacactagggcta
tctacagatgagcttgctcgaaggaatttactcaaaggtatcacggctgatgaaagcgca
acagtacatgacattgctactcttgctgtagtagttgttagacattgtggatgtacagct
gttgtccaagttccggtagatgctggtttgttgggcagtcctccaaaccatcaggacatt
gaaattgaagatcagcctgagggaggtagcaatgcgttaaatgttaatagcttgagaact
cttctgcataaatcgtctactcagtcttccagtgggatccagaggccacaaaatacagaa
attgaagatttgcaatctactacgtcctccgtaagaaaaatactaggagatagtctattg
aagttgcaagctgaggatacaaaacagagtatgtcaatcagatgggaacttggtgcatgc
tgggtgcagcatttgcagaatcaagcttcagggaagattgagcctaataaaactgaagat
actaaagttgaacctactgtcaagggcctaggtaaacagtttggtcagcttaaggagatt
aagaagaagatagatgagaagagtgataagactgatcttgccagagaaaattctgcactt
gatgccgttaatacaagcaagacgcaattggcagatggcaccaatgtaaaggaggataaa
gaaatggtgttgcagaaattgctccctgaagcagccttccttcgcctgaaggaatctgac
actggccttcatgttaagacacctgatgagttgataaagatggcacataaatactacgag
gataccgccctacctaagttggtagcagattttggttctcttgaactttctcctgttgat
ggaaggacattgacagattttatgcacaccaggggcctgcggatgtcttcattaggacgc
gtggttgaacttgcagacaagctcccacacgtacagtccctttgcatacacgagatggta
gttcgagcttttaagcatatattgcaggctgttattgcagccattgaaaataagaatgac
atggcagggccaatagcctcatgcttaaatattttgctgggatcattgccagcagaaaat
gacgatatcaatctaaattatgataataatctcaagaagaaatggttggagatcttccta
gataagagatttggttggagatggaacgaagaatcccttgatttgaggaagtatgctatt
ctacgtggactttgccacaaggttggacttgagctagttcctagagactatgatatggat
aactcacatcctttcaggaaatcagatattatcagtatggttcctgtttacaaacacgtt
gcgtgctcatctgcagatgggcgcacactattggaatcttcaaagacttccttggacaaa
ggcaaactggaggatgccgttaactatggtacaaaggcacttgcaaaacttgtggcagta
tgtggtccataccacagaatgacagctggagcatatagccttttagctgtagttctctac
catactggagatttcaaccaggcaaccatctatcaacagaaggctctggatattaatgag
agagaacttggccttgatcacccagatacgatgaaaagttatggtgatcttgctgttttc
tattatcgccttcaacatacagaattagcactgaagtatgtcaatcgtgctttgtatctt
ttgcacttgacatgtggcccttcacatcctaacactgctgcaacttacatcaatgtggca
atgatggaagaagggttaggaaatgttcatgttgcacttcggtacctgcacgaagctctg
aaatgcaaccaaagacttcttggtgctgatcacatacagactgcagccagttatcatgct
attgccatagccctgtctttaatggaagcgtactctcttagtgtccaacatgagcaaacc
acacttcgcatacttcaagcaaagcttggtttagaagatcttcgcacgcaggatgctgct
gcatggctcgagtatttcgagtctaaggcagttgagcagcaggaagccgcacgaaatggt
actccaaagcctgatgcttcaattgccagcaaaggtcatctcagtgtatcagatcttctt
gattatattaacccagacgcagagatcaaagcaagagaaattcaaaagaaacaggcccgt
gctaagattaaaggcagtgttggccaaaacaagtgggaaacaggcgatgatgaagatcac
agagatgtagtgccaaatcaagattatgcaaggactgaaaattctaatgataaagagaac
agcaccactgctcagcctgtggaatctaaagatgagaaacctgatgtcactgtaactcat
gtatctttaaatccgcaagatgatttcacagaggaagacacatctgatgagggatggcaa
gaagctgtcccaaagggacgataccagggaggccgcaagtctggtgcaagtgtaaggagg
ccaagcctagcaaagataaatactaattctttgagtacttctgataatgggcgatataaa
ggaaggccaccggccagcttcccttccccaagagtttcacctaatgagacggttcatgct
gatgctattagccctattgcgaagaagttggtgaagagttcaactttcggtcccaaacag
aatgccaatgcagtttcctcaaacagcactgaaaaatctactactacttccaagtcagca
ccagccagcccttcagttacagctttagctgccaagtcagtctcatctacaattccaatt
aatgtgcagtcgacaagaaaatcattgtcatacaaagaagtggcattggctgcaccagga
actattgttaaggcaatagaagatcaactgatgaaagaaaaggattccgacgagaaggag
actgatatcaccaaagaaccagcatcagtggagcaaatttcaggtgagcaggtttttgtg
gatcatgaaggacagaaaaaggcccaggaggcaagtgaggcagatattcttacatcttgt
tccaaggagactaatgatcatgctcatgagaaaaaagatgtagaaataacaaagaagaaa
gtgctagaaacatctccggaatgtgaagacgtggattcccagtccctgagtttggaagga
tcagaatcatcagacaaactattagaagatcatggaagaatttcaaaagagatagagact
tccacagtgaactgcaaggcagttactccactctcagaagaatcatcagagtccccggaa
gttggaagctgtgcagcgacagattgcagagatctttcatcttcacttgaacccaaaatt
gatgcttctgcttctactgaagatgaaaaagatgtaagaaatgagatgcctgaacagctg
tccagcggaggcaaaattgaaaagtctcccctgatggaatgcaaaaaggatggaactgaa
acagctaaagaatcaagcagcagactttctgcagctgcagctccattcagtccttccact
attccagcttttggttcagtcgcgattcctggcttcaaagaacatagcggactcttgccc
ccaccagtaaatatacccccaatgttgacaattcctgttcgtaaacatcctcatcaatct
gccactgcaagggttccttacggtccacggcttgccggcgggtacaatcgatcaggaaat
aggggccctcgtaacaagcctgttgtgcagaatgctgaaatccttcctgccgacgggaat
agttttagtcagaaggtgatgaatccaaatgctgctgagttcgtaccatgtcaaccttgg
attcctaatggctatccgttgtctagtgagtttccatcttcaccaaatggtgctccacta
tccccgcatagctttccaccttcaccaaatagtatggtgatatcacctacgcctgtatcc
tctgaagtatctgaaaacaatgaagtcagtaccggaggaaataatagcagtaacttagat
gttgtggaagttgagaatgacaatcaaaacgtagactctgagcagtctatagaaggcaaa
gtagtcactgtggaagctgagcaaagtaccactcagcaaaccccttcagaggatcttatg
gtagctggagaagctgctgatacattagtagtaacggaaaaggcaaagtgttgggctgat
tacagtgatggagaagctgaggttgttgaggttattagttaa

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