KEGG   Typha angustifolia (narrow-leaf cattail): 140779517
Entry
140779517         CDS       T11061                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140779517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140779517
Enzymes [BR:tang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140779517
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     140779517
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 140779517
NCBI-ProteinID: XP_072980708
LinkDB
Position
15:join(20605429..20605917,20606958..20607164,20608965..20609845,20610772..20611063,20611445..20612392,20612517..20612788,20613671..20614172)
AA seq 1196 aa
MEEEQSPHESDLETEFMVEDHIKGLSSSDPMNIDSPTNNMEKLDSSVGSLEKFCKDASRA
FFNEWGLISHQINSYNEFVSHGIQDLFDSLGEVTVEPGYDPSKKGGTAWRHATITFGKVR
LEKPVFWVGKNDIEEECLKLTPRHARLQNMTYSSQMKVEVRVQVYTQEKSDKAKSGKDQY
VHKRILTDDKKEITIGRIPVMVKSNLCWLHKLEKSDCLFDSGGYFLIKGMEKTFIAQEQR
CLTRLWVTDKPSWTVSYISEVKRKRIYIKLVELPKGEGYNGGRFINLFFLYATMPIWIMF
FALGASSDKEVFEMLDLEDCNAALVNIILATIKESDEQCEGFRKGDKARDYVDEQIKNSK
FPPTESFEEYVSKYLFPGISGNRQKALILGYMVKCLLLAFSGKRKCDNKDDFRNKRLDLA
GELLARELRAHIRHAQRRMVKTMQRDLYGDRDLQVTERYLDASIITNGINRAFSTGSWCH
PYRRTERCSGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPNPSYWGKLCFLSTT
DGENCGLVKNLAVTALVSSKIAEPLLENLISCGMEKLDECSSSSTSKIYKVILNGDWIGT
CSDPASFVLRFRSMRRTKLIHSQVEIKRDKHQREIRVFSDAGRILRPLLVVENLNKIKNL
KGGGAYSFQSLMDQEVIELIGVEEEEDCQTAWGIKHLFLRDEGQPVPRYTHCELDLSFLL
GLSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFKTVI
ADCLGRTDYTLGQKDDVARPEYFNGQNAIVAVNVHQGYNQEDSLVMNRTSLERGMFRTEH
FRSYKAEVENKEMKHIKSKDKVDFGKTESKKGRVDSLDDDGFPYVGASLQSGDIVIGKVS
ESGEDHSVKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVG
FLESQENFPFTSQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSMRYATPFTTAS
VDVITEQLHKAGYSRWGSEKVLNGRTGEMMRSMIFTGPTFYQRLIHMAEDKVKFRNTGPV
HPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCKRAAN
VILRPIPGGKKVRGPYCGFCRSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC
NT seq 3591 nt   +upstreamnt  +downstreamnt
atggaagaagaacaatcaccacatgaatcagaccttgagacagagttcatggtggaagat
catataaaggggctatctagttctgaccctatgaatattgattctcctacaaacaacatg
gaaaaacttgactcgagtgttggaagtctggagaaattctgcaaagacgcttcaagggcc
ttcttcaatgaatggggcctcatcagtcatcagataaactcctacaatgaatttgtatcg
catggaattcaggatctttttgattctcttggtgaagtaactgtggaaccaggttatgat
ccctcaaagaaagggggaactgcttggagacatgcaaccatcacatttggaaaagttagg
cttgagaaaccagtattttgggtggggaagaatgatatagaagaggaatgcctcaaactt
actccaaggcatgcacgcctacaaaatatgacttattcttcgcagatgaaagtagaagtt
agggttcaggtctatacgcaagagaaaagtgacaaagctaagtcagggaaggatcaatac
gttcacaagaggattctgactgacgataaaaaggagattaccattggaaggatacctgta
atggttaaatcaaatctttgttggctgcacaaacttgagaaaagtgattgtctttttgat
tctggaggttactttttgataaaaggaatggagaagaccttcatcgcacaggagcagaga
tgtttgacaaggctctgggtcactgataagccaagctggactgtgtcgtacatttctgaa
gtaaagaggaaaagaatctatataaaacttgttgaactgccaaaaggtgaaggttataat
ggtggaagatttattaatttattctttttgtatgcaactatgccgatatggataatgttt
ttcgctcttggtgcatcatctgataaggaagtttttgagatgcttgatcttgaagattgt
aatgctgctttagtcaacataatactagcaactataaaagaatcagatgagcagtgtgag
ggtttccgtaaaggagataaagctcgtgattatgtagatgaacagattaaaaactcaaag
tttcctccaactgaatcttttgaagaatatgtttctaaatatctatttccgggtattagt
gggaataggcagaaagcacttatcctgggatatatggtaaaatgcctgttgcttgccttt
tctgggaaaagaaaatgtgacaacaaggacgatttcaggaataagaggttggatttagct
ggtgaattacttgcacgagagttgcgggcccatattagacatgctcagaggcgcatggtt
aagacaatgcaaagagatttatatggggaccgtgacttacaagtgactgaacgctatttg
gatgcttctattattacaaatggtattaacagggccttttcaactggttcatggtgtcat
ccgtacaggaggacagaaaggtgctcaggcatagtggcaacccttagaagaacaaatccc
cttcaaatgatgtctgacttgagaaaaacgcgtcaacaggttgcttacgcagggaaagcg
ggagatgcacgatacccaaacccttcctattgggggaaactatgcttcttgtccactaca
gatggtgaaaattgtgggctggtgaaaaatttagcagtgactgctcttgttagctcaaaa
atagcagaacctttactggaaaacttgatttcctgtggaatggaaaagctggatgaatgt
tcttcatcatcaacgagcaaaatatataaagtcattttgaatggagattggattggtact
tgctcagacccagcctcattcgtcttaagattcagatctatgcgccggaccaagctaatc
cattcacaggtggaaatcaagagggacaagcaccaaagagaaattcgtgtattttctgat
gcaggacgaatactaaggccccttcttgtagttgagaatctgaataaaataaaaaatctc
aagggaggaggagcctactcattccaatctcttatggaccaagaagtcatagaactcatt
ggtgtcgaagaagaagaggattgccaaactgcatggggaataaagcacctttttttgagg
gatgaaggtcagcctgttcccagatacacacattgtgaacttgacctatcattcttattg
ggcttgagttgtggtatcatccctttcgccaaccacaattttgctaggagggttctgtac
caagctgaaaaacattcccagcaggctattggcttctctacaacaaatccaaacatccga
gttgacactctttcgcaccaactttactatccacaaaggccccttttcaagactgtgata
gctgactgccttggtcggactgattacacacttggacaaaaagatgatgtggctagacct
gaatatttcaatggtcagaatgcaattgttgcagtcaatgttcatcaaggatataatcaa
gaggattccctagtcatgaataggacctcactagagcgcggcatgttccgaacagaacat
tttaggagttacaaagctgaggttgaaaacaaggagatgaagcatataaagtcgaaggat
aaggttgacttcggcaaaacggaaagcaagaaagggcgggtggacagtttagatgatgat
ggattcccatatgttggtgcaagtctccaaagtggtgatattgtgattgggaaggtctca
gagtcaggagaagaccacagtgtaaagctaaaacatacagaaaaagggatggtacagaag
gtagtgctttcagcaaatgatgaggggaagaactttgcagttgttactctgagacaggtt
cgatctccatgccttggggacaagttttccagtatgcatggtcagaaaggtgtagttggt
tttctggagtcgcaagaaaattttccttttaccagtcaaggaatagttcctgatattgta
ataaatccacatgcatttccaacacgacaaacacctggccagctgctcgaagctgctttg
ggaaagggtattgcatgtggtggttcaatgagatatgcaacaccatttaccactgcctct
gtagacgtcatcacagagcagttgcacaaggctggatactcaagatgggggagtgagaag
gttctcaatggtcggactggtgaaatgatgcgatccatgatcttcacaggccccaccttt
taccagaggttgattcatatggctgaagataaggtgaaattccggaataccggcccagtt
cacccactaacgaggcaaccggttgcagacaggaagagatttggtggagtgaagtttgga
gaaatggagcgtgactgcttactcgctcatggagcagctgctaacctccatgagcggctt
ttcatgctcagcgatttctcacagatgcacatctgtcagacatgcaaacgagctgcaaat
gtgatcctgcgtccaatacccggggggaagaaggttcgtggcccttattgtggtttctgc
cggtctgctgaaaacatcgtccggatcaatgtgccttacggagcaaagctactctatcaa
gaactcttcagcatgggtatttgtctcaagtttgagacggaagtttgttaa

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