Typha angustifolia (narrow-leaf cattail): 140779576
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Entry
140779576 CDS
T11061
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140779576
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140779576
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140779576
Protein phosphatases and associated proteins [BR:
tang01009
]
HAD phosphatases
Fcp/Scp phosphatases
140779576
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140779576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
140779576
NCBI-ProteinID:
XP_072980801
LinkDB
All DBs
Position
15:join(6966757..6966944,6967627..6967709,6968346..6968473,6969320..6969500,6969688..6969977,6970660..6970848,6971052..6971090,6971418..6971729)
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AA seq
469 aa
AA seq
DB search
MQQDDCEVASMSLAADSPSLSSSSSDDFAALLDAELELASSKSCPDDDGQAVSVAESEFQ
DRRTKKQKIEDFDTEELQGRVMAESNRENIGTSTEILNDICPPHPGFFKGLCMRCGQLEE
DDGSAVAFGYIHKDLKLGTREIDRLRGADLKNLLHGKRLILILDLDHTLLNSTCLADVSA
EEEYLLRQVDCMKDDPGRSLFRLDTIRMLTKLRPFVPTFLREASKYFEMYVYTMGERFYA
LEMVKLLDPGNVYFNSKVISQSDSTQRHKKGLDVVLGAESVVVILDDTEFVWHRHKENLI
LMDRYHFFASSCRQFGFNTISLSVARKDERESDGALATILNVLKRIHQMFFDPDLETDLS
SRDVRQVIKKIRQEILDGCKIVFSWGCSSKSRAEDQPMWKMAEQLGATCCTEVDSSVTHV
VAIDSGTQNARWALQNEKFLVNPRWIEASNYLWHRQKEDDFLVSNTRNQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggatgactgcgaagttgcaagcatgagtttggctgcagattccccgtcgcta
tcgtcaagcagcagcgatgatttcgctgcattgcttgatgcggagttggaattggcttcg
tctaaatcttgtcctgatgatgatggccaagctgttagtgttgcggaaagtgaatttcaa
gatcggaggactaagaaacagaaaattgaagactttgatacggaggagttgcaggggaga
gtaatggcagagtcaaatcgagaaaatattggtacatctacagaaatcctaaatgatata
tgccctccacatcctggattttttaaaggattatgcatgagatgtggacagctagaggaa
gatgatggatcagcagttgcttttggttatatccataaggatctaaaactaggtactaga
gagattgatagactacgcggagctgatctaaagaatctgttgcatgggaaaaggctgata
ctgatattagacttggaccatactctactgaattcaacctgccttgcagatgtatctgcc
gaagaagaatatttacttagacaggttgattgcatgaaagatgatcctggcagaagttta
ttcagattggacaccatccgtatgctaacaaagttacggccctttgtgccaaccttttta
agagaagcaagcaaatattttgagatgtatgtgtatactatgggggagcgcttttatgcc
cttgaaatggtgaagcttcttgaccctgggaatgtctattttaattccaaagtgatttca
caatctgatagcacccagagacataaaaaaggcctcgatgtggtgctgggagctgaaagt
gttgtggtgattcttgatgacacagagtttgtgtggcataggcataaagaaaacctaatt
ctaatggataggtatcatttctttgcttctagttgccgccagtttgggtttaacacgata
tcattatcagtggccaggaaagatgaaagagaatctgatggtgcccttgcaaccatttta
aacgttctaaagcgaattcaccagatgttctttgatccggaccttgaaactgatctgtct
tccagagatgtaagacaggtaatcaaaaagatacgccaggaaatattagacgggtgcaaa
atagttttcagctgggggtgctcatctaaatcacgtgctgaggatcagccaatgtggaag
atggcagaacagttaggcgcaacatgctgtacggaagtggactcatctgtcacccatgtt
gttgcgatagattcaggaactcaaaatgctcgctgggccttgcagaatgagaaatttctg
gttaacccacgttggattgaggcgtcaaactacctgtggcatcggcaaaaggaagatgac
tttttagtcagcaatacaagaaaccagtga
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