Typha angustifolia (narrow-leaf cattail): 140779621
Help
Entry
140779621 CDS
T11061
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140779621
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140779621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
BipA_C
DUF1367
Dna2
HVO_0758
Motif
Other DBs
NCBI-GeneID:
140779621
NCBI-ProteinID:
XP_072980884
LinkDB
All DBs
Position
15:complement(join(7450767..7451789,7454870..7455004))
Genome browser
AA seq
385 aa
AA seq
DB search
MEKELLETFDAAKKAADAAEVERCVDALRRMKKIPVSTKVLVETQVGKRLRYLTKHAEER
IQTVASDILNFWKNVVIEETSKSSTKNNSPREKNSLKVVRSSEKEENIKIEKNSNASWAV
KSETVLISQNLKAEKTIGDVELKDDKLTKSDIMKIERSDSGRVEKVCAGKAIVAGRILKE
EKQVSDIKKPTSDPLRPPKLTSVIKCNNPARDKYREILAEAFSKVLDETSKSQREEVRNI
LDQVDACDPFRVAVTVESVLFEKLGPPTGAQKQKYRSIMFNLKDNNNPDFRRKILLGHVM
PEKLVEMKPEEMASDERKLANQQIKEKALFECERAGAPKATTDQFKCGRCGQRKATYYQL
QTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctcctcgagaccttcgatgccgctaagaaggcagcagacgcggccgag
gtggagcggtgcgttgacgcgctaaggcggatgaagaagattccggtgtcgacgaaggtt
ctcgtggaaactcaggtcggtaagcgtcttcgctacctcactaaacatgctgaagagagg
atccagactgttgcttcagacatattaaatttctggaagaacgtagttattgaagagaca
tcaaagagtagtacaaaaaataacagcccacgagaaaagaattctttgaaggttgtgagg
agttctgagaaagaagagaacattaagattgaaaaaaattcaaatgcttcttgggctgtt
aagagtgagactgtcttaatatctcaaaacctgaaggctgagaaaacaattggtgatgtg
gaattgaaggatgacaagttgacaaaatcagacatcatgaagatagaaagaagtgactca
gggagggttgagaaagtttgtgctggtaaagctattgtggcagggaggattctcaaggaa
gaaaaacaggtgtctgatattaagaaaccaacatcagaccctcttcgccctccaaagctg
acatcagttataaaatgcaacaatcctgctagagataagtaccgggaaattcttgctgag
gctttctctaaagttttagacgagactagtaaaagccaaagagaagaagttaggaatatc
ctagatcaagtagatgcatgtgatccattccgtgtagctgttactgttgaatctgttctc
tttgaaaaattaggacctccaacgggagctcaaaagcaaaagtacaggtccataatgttc
aacctgaaggataacaataacccagacttccgaagaaaaattctccttggacatgtgatg
cctgaaaaactagttgagatgaaacctgaggaaatggccagtgatgagaggaaacttgca
aatcagcaaatcaaagagaaagccttatttgaatgtgagcgagctggagctcctaaagca
acaactgatcagttcaaatgtggacggtgtggacagcggaaggcgacgtactatcagttg
caaacgcgctctgctgatgaaccaatgactacattcgtgacatgtgtgaattgcaacaac
cattggaagttctgttaa
DBGET
integrated database retrieval system
