Typha angustifolia (narrow-leaf cattail): 140779658
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Entry
140779658 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140779658
Membrane trafficking [BR:
tang04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
140779658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
140779658
NCBI-ProteinID:
XP_072980947
LinkDB
All DBs
Position
15:join(1988529..1989374,1989494..1989694,1990448..1990643,1990965..1991149)
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AA seq
475 aa
AA seq
DB search
MASSDRIVSYSSLSKLDRGSQYDEKSRADLSCGYPKSFCSSVPRSLGQEYLYEPSLESDL
PEGNDFIEESCIFPQSKANPEINVKTVLSGLVTILTGRNREHIDIQSQQSSSSDISFLSS
TGNGDSDIHPSVCIPSAPPLLEGEALDYSAYSEMLQAEPPDWLPDSYATACMQCNLPFTV
ITRGRHHCRFCGGIFCRDCTKGRCLLPIKFRERNPQRVCDACYDRLDPLQGILIHYISNA
MQSAKHDVMDWTCTRGWLNLPVGLSMEYEIYKSTNTLRSYCQVARLNPEKSIPWAVLKGA
KGLAILTVAKAGALLTYKVGSGLVLSRRSDGSWSAPSAILSVGLGWGAQIGGELMDFIIV
LHGRKAVKAFSSRMHISLGAGLSAAAGPIGRVLEADLRTGDRGSGMCYTYSCSKGAFVGV
SLEGNIVATRMETNLRFYGDPYLTTTDILLGTVERPRAAGPLYSALDDLYSRVGC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatctgacagaatagtttcatattcttcactctccaagcttgacagaggaagt
cagtatgatgaaaagagtagagctgatctctcatgtggctatcctaaaagtttttgttca
tctgtgccaagatccttaggacaggaatatctctatgagccatcactggagtctgactta
ccagagggaaatgattttatcgaggaatcttgtatttttcctcaatctaaagctaatccc
gagataaatgtgaaaactgtacttagtggcttagttacaattcttactggcaggaacaga
gaacatattgatattcaatcccaacaaagttctagctcggatatatcatttcttagttcc
acaggtaatggagatagcgatatacatccatcagtttgcataccaagtgcaccacctcta
cttgaaggagaagctctagattatagtgcatacagtgaaatgctgcaagcagagcctcct
gactggttgccagatagttatgctactgcttgcatgcaatgcaatcttcctttcacggtt
attactcgcggaaggcatcactgtcggttttgtgggggcatcttctgcagagactgtacg
aagggaagatgtttgttgcctatcaagttcagagagcggaaccctcagagagtatgtgat
gcttgttatgacaggcttgatccactgcagggcatattgatccactacatcagcaatgca
atgcaatcagcaaaacatgatgttatggattggacatgcacaagagggtggttaaatttg
cctgttggtttatcaatggaatacgagatatacaaatcaacaaatacattgagaagttat
tgtcaggttgctagattaaatcctgagaagtctattccctgggcagttctcaaaggagca
aaggggcttgccatattaactgttgctaaagctggtgcacttcttacctacaaagttggt
agtggtctagtactttctcgtaggtctgatgggtcatggtctgcaccatctgccatactc
tctgttggtttaggatggggagcacagattgggggtgaactcatggattttatcattgtg
ctacatggacgtaaagctgtcaaagcatttagtagtcgcatgcatatatctcttggagct
ggtttgagtgctgctgctggaccaattggcagagttctggaagcagatcttaggacagga
gatagagggtctggaatgtgttatacttacagttgcagcaaaggtgcttttgttggtgtc
tcattggaaggtaacattgtcgcaacaaggatggaaactaatctgcgcttctatggtgat
ccttatctgaccaccactgacattctcctaggcacagtggagagaccaagggctgctggg
cctttatactctgctctggatgacttatactccagagttggatgctag
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