KEGG   Typha angustifolia (narrow-leaf cattail): 140779704
Entry
140779704         CDS       T11061                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 2
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    140779704
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tang01002]
    140779704
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140779704
   03036 Chromosome and associated proteins [BR:tang03036]
    140779704
Peptidases and inhibitors [BR:tang01002]
 Metallo peptidases
  Family M1
   140779704
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     140779704
   Coactivators
    SAGA/TFTC/STAGA complex
     140779704
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     140779704
SSDB
Motif
Pfam: Peptidase_M1 Peptidase_M1_N HEAT_2
Other DBs
NCBI-GeneID: 140779704
NCBI-ProteinID: XP_072981032
LinkDB
Position
15:complement(join(20980083..20981100,20981966..20982149,20982218..20982383,20982457..20982547,20982688..20982746,20982884..20982973,20984014..20984100,20988828..20988870,20988949..20989028,20991550..20991606,20991689..20991814,20992932..20993019,20993111..20993449,20993539..20993636,20996244..20996312,20996910..20996963,20997037..20997162,20999245..20999336,20999436..20999520,20999676..20999829,20999936..21000135,21001064..21001130,21001229..21001374,21001496..21001862,21003088..21003203))
AA seq 1333 aa
MAKARRQKNEEQKPESSGGVVLHQKLCLSIDMENKRIYGYTELKVLLQEGEHIALHADNI
NVRSISVDGEPSEFEHFPHYQDIDEEKRWSSVSCSKSAADLAGSTYISSLNKETVPNLII
SCHQSMKSENEQHIQENGGNIVQSSSEEQIVNDYNGLLEDKNVKLVRIDYLIDRADTGIH
FAGDMLHTNNQIRRAHCWFPCMDNVAQRCSFDLEFTVSTNLVAVSNGNLLYQVLSKDDPP
RKTYVYKLNTPVSADWISLVVGPFKILPDCQNSVLSHMCLSPNFSKLQNTVGFFHNAFSY
YEDYLSISYPFGSYKQIFIPSDLTTSSMSLGASMCIFSSDVLYDEKIIDQTINTRIKLAY
ALARQWFGVYITAEEQNDEWLLNGLAGFLTDNFIKRFLGNNEARYRRFKANCAVCKADVC
GATALSSSAASGDLYGTQTIGLYGKIRSWKAVTVFQMLEKQMGPDSFRKILQMTVSKAPG
PNRSSRTLSTKEFRHLANKVGNLERPFLKEFFPRWVESCGCPIMRMGISYNKRRNMVELA
VMRDCTAKGGSSSGSNPDNEIQEGGAGWPGMMSIRVHELDGMYDHPILPMAGESWQLLEV
QCHCKLAAKRIQKPKKGSKHDGSDDNADAVTTQDIRTGTDSPLLWIRVDPEMEYLAEIHL
HQPIQMWINQLEKDKDVIAQSQAIAEMEKLPQLPFSVVNTLNNFLNDTKAFWRVRVEAAY
ALALTASEETDLAGLLHLIKFYKSRRFDAHIGLPRPNDFRDVPEYFVLEAIPHAVALIRA
ADKKSPREAIEFVLQLLKYNDNNGNPYSDVYWLAAMVQAIGELEFGQQTVLFLSSLLKRI
DRLLQFDSLMPSYNGILTISCIRALSQIALKMSTFIPLDRACELIKPFRSIEKTWKVRIE
ASRVLLDLEFHCKGLEAAISLFLKFLDEEPSLRGETKLACHVCHLCQVNLESHTENQISC
TTLVGLLRLLASRRAFNNVFLRHQLFCILQVLAGRSPTLYGVPKVLPPTVSPETYSNQHV
EAGFLKLKLSRPQDTPIDMPNLHDALPNAEAAKETDNISNSSERRMNILKIRVKQTGSSS
KTDDVDHQMDLSRAGPNENELGPCSSVSVDAPIGGVNDPLNISTQNNEEVNSSHDRESRM
TASIGSAKLGSKLEISKELQCTADSRLDNLSKDQLSHVTIDGDEVVHKTVPLQAGSVVSH
DGDQAQLSMGDHEAKEKRKKDKKEKDKKRKREDRSDKKDDPQYLERKRLKKEKKRMEKEQ
AKMRKDVERASSSELQNLMKSVESHGALTPRDSSTLQGVEPHVSTKETAADATQASSAPK
IRIKIKSRSIGNI
NT seq 4002 nt   +upstreamnt  +downstreamnt
atggcgaaggctcggaggcagaagaacgaggagcagaagcccgagagctcgggaggagtt
gtcctccaccagaagctctgcctctcgatcgacatggagaacaagaggatctacgggtat
acagagttaaaagttcttctccaagagggcgaacatatagcattgcatgccgataatata
aatgttaggagtatatctgtagatggggagccatctgagtttgaacactttccacattat
caagatatcgatgaggagaagagatggtcttcagtatcatgctccaagtcagctgctgat
cttgctggttcaacatacatttcatctcttaataaagaaacagtccccaaccttatcatt
tcatgtcatcaatcaatgaagtcagaaaatgaacaacacatccaagaaaatggggggaat
attgtccaaagttcttccgaagagcagattgttaatgattacaatggtctcctggaagac
aagaatgtgaagttggttcgcattgattatctgatagatagggccgatactggcattcat
tttgcgggcgatatgctacacactaataatcagataaggcgtgcacactgttggttccct
tgcatggataatgttgcacaacgctgctcatttgatctggaatttacagttagcactaat
ttagtggctgtcagcaatggtaacttactttatcaggttttgagcaaggacgatcctcca
aggaaaacatatgtatataagttgaacactcctgttagtgctgattggatatcattggtt
gttggtcccttcaaaattcttcctgattgtcaaaatagtgttttatctcatatgtgctta
tctcccaacttttctaagcttcaaaatactgttgggtttttccacaatgcatttagctat
tatgaagattacctttccatatcgtatccatttggttcatacaagcagattttcatccca
tctgacctaacaacatcatctatgagcttgggtgcatccatgtgcatcttcagttctgat
gtcttgtatgatgagaagatcatagatcagacaattaatacaagaatcaaacttgcatat
gcactggcaaggcaatggtttggagtttatattactgcagaggaacaaaatgatgaatgg
ttgttgaatggtttagctgggtttcttactgataacttcattaagcgttttcttggaaat
aatgaggcacgctatcggcgtttcaaggccaattgtgctgtatgtaaagctgatgtttgc
ggagcaactgctttgagctcctctgctgcttcaggcgatctatatggaactcaaaccatt
gggttatatggaaaaattcgatcttggaaggctgtaacagtatttcaaatgttggagaag
cagatgggtccagactcttttcgtaagattctacagatgactgtctcaaaagctcctggt
ccaaatcgctcttccagaacgcttagtaccaaagagttcaggcaccttgccaataaggtt
ggtaatctggaacgtcctttccttaaagaattctttcctcgatgggttgaatcttgtggg
tgtcctatcatgaggatgggcatctcctataacaaaaggagaaatatggttgaattagct
gttatgagagattgcacagcaaaaggtggttccagttctggtagtaatcctgataacgag
attcaagaaggtggtgctggatggccaggaatgatgagcatacgagttcatgaacttgat
gggatgtacgatcatccaatattgcctatggctggggaaagttggcaactgttggaagta
caatgccattgcaaacttgctgcaaagcgcatccagaagcctaagaaagggtcgaagcat
gatggctctgatgacaatgcagatgctgttacaactcaggatattcgcactggcactgat
tcaccgttgctgtggatcagagttgaccctgagatggagtaccttgctgaaattcatctt
caccaacccatccagatgtggattaatcaattagagaaagataaggatgtcattgctcag
tcacaagcaattgctgagatggagaagctaccgcaacttccattttctgttgttaatact
ctcaataatttcctgaatgatacaaaggcattttggagggtaagagtagaagcggcatat
gcattggcattgacagcttctgaggaaactgacttggcaggtctacttcatttgatcaag
ttttataagagtaggagatttgatgcacatattggacttcccaggccaaatgatttccgc
gatgttccggagtactttgttcttgaggctataccacatgcagtagcattgataagggca
gcagacaagaaaagtccaagagaagccattgaatttgttctgcaattgcttaagtacaat
gataacaatggaaacccctactctgatgtctattggcttgctgctatggttcaggcaatt
ggcgaacttgaatttggtcagcagactgtactctttttgtcatctctactcaaacgtatt
gatcggctactgcaatttgacagtcttatgccgagttacaatggaattttgactataagc
tgcattcgtgcgctatcacaaattgcattgaagatgtccactttcatacctcttgatcgt
gcttgtgaactgattaaaccatttcgcagcattgagaaaacttggaaagttcgtattgaa
gctagtagagtgcttcttgatcttgagtttcattgtaaaggtcttgaagcagctatatcc
ttgtttttgaaatttttagatgaagagccatctttacgaggagagacaaagttagcttgt
catgtttgtcatttgtgtcaagtaaatcttgaatctcacactgagaatcagatatcttgt
acgactcttgttgggcttcttcggctgcttgccagcagaagagcattcaacaatgttttt
cttcggcaccagttgttctgcattttgcaagttcttgctgggaggtccccaacgctatat
ggtgtcccaaaggttcttcctcccacggtgtctcccgagacatatagcaatcaacatgtt
gaagctggtttcctcaagctaaagttatcaaggcctcaagatactcccatagatatgccg
aacctccatgatgctttgcctaatgcagaagctgctaaagagactgacaatatctctaat
agcagcgagagaaggatgaatattttaaaaattagagttaagcaaactggatcgtctagt
aaaacagacgatgttgatcatcagatggatctctctcgagctggaccaaatgaaaatgaa
ttgggtccttgtagttctgtatccgttgatgcacctataggaggagtaaatgatccattg
aacataagcactcagaacaatgaggaggtcaattcttctcatgaccgtgaatccagaatg
acagccagcattggcagtgcgaagttagggagcaagcttgagatttccaaggagttgcaa
tgtacggctgattcaagactagacaatctctctaaggaccagttatcccatgtaactatt
gatggtgatgaagttgttcataaaactgttcctcttcaagctggttccgtggttagccat
gatggagatcaagctcaactatcaatgggtgatcatgaagcgaaagagaaaaggaagaaa
gataagaaggaaaaggataaaaaacgtaagcgagaggataggtcggacaaaaaagatgat
ccacagtatttggagagaaagcgtctaaagaaggagaagaaaaggatggagaaagagcag
gcaaagatgcgaaaagacgtggaaagggcttcttcatctgaattacagaacctaatgaaa
tctgtagagtcacatggagctttgaccccaagggattcaagcacgttacaaggtgtggaa
ccacacgtttctactaaagaaacagcagcagatgctacacaagccagttcggcacctaaa
atcagaatcaaaattaaaagccggagtattgggaacatttga

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