KEGG   Typha angustifolia (narrow-leaf cattail): 140779745
Entry
140779745         CDS       T11061                                 
Name
(RefSeq) small RNA degrading nuclease 1-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    140779745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tang03009]
    140779745
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    140779745
SSDB
Motif
Pfam: HIP1_clath_bdg TPD52 RRM_1 SET_assoc
Other DBs
NCBI-GeneID: 140779745
NCBI-ProteinID: XP_072981085
LinkDB
Position
15:complement(join(17701117..17701440,17701884..17701988,17702064..17702171,17702234..17702365,17703252..17703352,17703496..17703565,17703652..17703768,17703942..17704082,17704970..17705038,17706345..17706434,17706535..17706714,17706793..17706825))
AA seq 489 aa
MGKLITNAEKEVLVEIVRFTQKQRLEGAEGGWKDFLTCHDKKFGAGLSDPVKRSRDILIA
FLKTFPQDVRKYFDKMVRRHNDRNAIEQYIKEFPDLESPEQRLVHLTMEHPHYIQYYSFP
SHNEGWKVMPLGKISEAMNTKAMVSVDCEMVLCQDGTEAVVRICIVDRDLEVKLDKLVNP
NKAVSDYRTHITGVSAKDLEGVTCSLADVQKSLRKLLSNGTILIGHSLFNDLLALKFDHL
RVIDTSYIFKYKDLPPGASPSLNNLCKSVLGFSVREEGEPHNCLNDAHAAMKLVLAKLEQ
GFDDPIEVARNVPKSDLAKLLLHKIPVDVSCQELLNIFPEESNVDIKADIRVRGERYSTF
VVFKNAMAAEEAFRVLDGKESQDSTGRPQKQVFLKLCSGRTTSFYIRKMAADIPLKESSK
KRSAQAINNGSEVQQAHDGADNMKRQKTCLHPCDHVKEIEKLKQELRQREDEIYRLQKIL
AALSRKHGL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggggaagttgattactaacgccgagaaggaggttcttgtcgagatcgtgaggtttacc
cagaagcagcgattagaaggagcggaaggaggatggaaagatttcctaacatgccatgat
aagaagtttggtgctggtttaagtgatccggtgaagaggtctagagatattttgattgct
tttctcaaaacattccctcaagatgtccgaaagtattttgacaaaatggttagacgtcat
aatgaccgcaatgccattgagcagtatatcaaagaattccctgacttggaatctcctgaa
cagagactggtgcatttgacaatggaacacccacattacatacaatattactcttttcca
tcccacaatgaggggtggaaagtaatgcctctaggtaaaatatctgaggcaatgaacacg
aaagccatggtttctgttgattgtgagatggtcctttgccaagatggcactgaagcagtg
gtcagaatatgcatagtggaccgtgatttggaggtcaaactggataagcttgtcaacccc
aataaagctgtttctgactatcgaacacacataactggtgtatctgctaaagatttggag
ggtgttacttgttcattagctgacgttcagaaatccttgaggaagctcttatcaaatgga
actatcttgattggccacagtttatttaatgatttacttgcactaaaatttgatcacctg
cgagtcattgacacatcatacatatttaagtacaaagatttacctcctggagcatcacct
tcgttaaacaacttatgcaagtctgtgttagggttttctgttcgagaggaaggtgaacca
cacaattgtttaaatgatgcacacgctgcaatgaagttggtccttgctaagctggaacag
ggatttgatgatcctattgaagttgcacgcaatgtacctaaatctgatctggcaaaactg
cttcttcacaaaataccagttgatgtatcttgtcaggaactattgaatatatttccagaa
gaatcaaatgttgatatcaaggctgacataagagtacgaggtgaacgttattccacattt
gttgtctttaaaaatgccatggcagcagaagaagctttcagagttctagatggtaaagaa
agccaggattccactggtcgtccccagaagcaggtctttttgaagctttgcagtggacga
accacgagcttttacattcgcaagatggcagctgatatcccgcttaaggaatcatcaaaa
aagagatcagcacaagctatcaacaatggttcagaagtccaacaagcgcatgatggcgct
gataatatgaaaagacaaaaaacatgtctgcatccgtgtgatcatgttaaagagatagag
aagttgaagcaggaactccgccaaagagaggatgaaatatatcgtttgcaaaaaatcctc
gctgccttgtccagaaaacatggtttatga

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