Typha angustifolia (narrow-leaf cattail): 140779796
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Entry
140779796 CDS
T11061
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tang03110
]
140779796
Chaperones and folding catalysts [BR:
tang03110
]
Heat shock proteins
HSP100
140779796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
TniB
nSTAND3
NBD_SMAX1
AAA_14
NACHT
Mg_chelatase
AAA_28
AAA_18
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
DISC1_C
Motif
Other DBs
NCBI-GeneID:
140779796
NCBI-ProteinID:
XP_072981169
LinkDB
All DBs
Position
3:join(438697..439255,441438..441553,441638..441760,441842..442027,442278..442493,442735..442952,443514..443589,443668..443757,444064..445242)
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AA seq
920 aa
AA seq
DB search
MAGALIQSAVLPALSRRHSQTRRSGKARRAAKMMCNLQVGPVSFQGFSGLRLANNLDFSS
RSRQDFRSMVASQVFATKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ
ILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSL
EEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMVGESTEAVGAG
VGGGSTGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEP
GVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ
SDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPAL
ERRFQPVKVPEPTVDETIQILQGLRERYEIHHKLRYTDDALVAAAHLSHQYISDRFLPDK
AIDLIDEAGSRVRLQHAQLPEEARELDKELRQITKEKNEAVRGQDFEKAGELRDREMELK
AQITALIDKGKEMSKAESESGDSGPVVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMED
TLHNRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALATYYFG
SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP
DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS
YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKEKEIDL
QVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGN
VIVLNGGSGVPEALSPAIPV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctttgatccagtcagcagttcttcctgctctaagtagaagacacagtcag
actcgcagatctgggaaggccagaagggcagccaaaatgatgtgcaatttgcaagtgggc
cctgttagtttccaaggattttcaggcttgcgattagcaaataatttggatttctcatct
cgatctaggcaggattttcgctctatggtagcaagtcaagtttttgcaaccaagggaaag
gctagccggggagttgctgtagctatgtttgagcgcttcacggagaaagctattaaagtt
attatgctagcacaagaagaagcaaggaggctaggccacaattttgttggaactgaacaa
atattgttgggtcttattggtgaaggaactggaattgctgcaaaagtgttgaaatcaatg
ggcattaatcttaaagacgcacgtgtggaagttgagaagattattgggaggggcagtgga
tttgttgctgttgaaataccattcacaccacgtgccaaacgtgttttggaactctcatta
gaggaagcccgtcaactaggtcataactatatagggtctgagcatttgcttctgggattg
cttcgtgagggtgaaggtgttgctgctcgtgtacttgagagtctaggtgctgacccaagc
aacatcagaacacaggttatacgaatggttggcgaaagcacagaagctgttggtgcggga
gttggaggaggaagcactggccagaagatgccaacgctagaggagtatggaactaatttg
acaaagttagctgaggagggtaagctggatccagttgttggcagacaggatcagatagag
cgtgtcactcagatcttgggaaggcggacaaagaataatccttgccttattggtgagcct
ggagttgggaagactgctattgcagaaggacttgcacaacgcatagcaaatggtgatgtt
ccagaaacaattgaaggaaagaaggttattacccttgatatgggactccttgttgctggt
acgaagtatcgtggagagtttgaggaaagattgaagaaacttatggaggaaattaaacag
agtgatgagattatcctcttcatcgatgaagtccacacattaattggagcaggagcagca
gagggtgcaatagatgctgctaatatcttaaaaccagctcttgctagaggtgaattacag
tgtattggggccacaacactggatgagtacaggaaacacattgagaaagatccagctttg
gaaagacgatttcaaccagtgaaagtaccagagccaactgttgatgaaacaatacagatt
ctgcagggactccgtgagagatatgagattcaccataaacttcgttacacggatgatgct
ttagttgctgctgcacatttgtcacatcaatatatcagtgaccgcttcctccctgataaa
gcgattgacttgattgatgaagctggttctcgtgtcaggcttcagcatgcacagcttcct
gaggaggccagagagctagacaaggagcttaggcagatcaccaaggagaaaaatgaggca
gtacgtggtcaagattttgagaaggccggggagttgcgagatcgagaaatggagttgaag
gcccagatcacagccctgattgataagggcaaagagatgagcaaagcagagagtgagtca
ggtgattctggcccagttgtcacagaagcagacattcaacacatagtgtcttcttggact
ggaatcccggtggagaaagtctcaagtgatgagtcagaccgcctcctgaagatggaggat
actcttcacaatcgcattattggccaggatgaagctgtcaaagcgataagccgtgccatc
cgccgtgcccgtgttggcctaaagaatcccaaccggccgatagccagcttcatcttttct
ggtccaactggtgttggaaaatcagaattggcaaaagcattagctacctactattttggg
tcagaggaagccatgatccggcttgacatgagtgaattcatggagagacacacagtttcc
aagctaattggctcaccacctggttatgtcggctatactgagggaggtcagctaactgaa
gcagttcgccgtcgcccctacaccgttgtcctatttgatgaaattgagaaggcccaccca
gatgtcttcaatatgatgcttcaaatattagaagatgggagattaacagacagcaaagga
cggacagtagatttcaaaaacacactcttgatcatgacatctaatgttggaagtagcgtg
attgagaagggagggcgcagaatagggttcgatcttgactatgacgagaaggacagcagt
tacaaccgaatcaagagcctggtcacagaggagttaaagcaatacttcaggcctgaattc
ttgaacagattagacgaaatgattgtgttccgtcagctgacaaagctagaggttaaagag
atcgctgatataatgctgaaggaagtttttgatagactgaaggaaaaggagatagatctt
caagtaacagagagatttagagatagagttgttgatgaaggttacaacccaagttatgga
gccaggcccctccggagagctatcatgcggcttctagaagacagcttagctgagaaaatg
cttgcaggtgaggtgaaagagggagattccgcaattgtcgatgtggattcagaaggtaac
gtaattgtcctcaatggtggaagcggtgttcccgaggcactatccccagctattcctgta
tga
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