KEGG   Typha angustifolia (narrow-leaf cattail): 140779799
Entry
140779799         CDS       T11061                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like isoform X1
  KO
K16280  E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140779799
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140779799
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140779799
SSDB
Motif
Pfam: Copine zf-C3HC4_3 vWA-TerF-like zf-C3HC4 zf-C3HC4_2 Prok-RING_4 zf-RING_UBOX
Other DBs
NCBI-GeneID: 140779799
NCBI-ProteinID: XP_072981170
LinkDB
Position
15:complement(join(22544351..22544431,22544507..22544563,22544747..22544903,22544992..22545119,22545201..22545306,22545397..22545476,22545675..22545772,22545856..22545969,22546077..22546217,22547498..22547582,22549550..22549736,22549843..22550123))
AA seq 504 aa
MIAVLLPVHVLPYCFHHFRSSIVGIVLFSLSHSFNLFFYFYFAPSALFVGGFPVIVMDFV
KLNHLRGLKKFYISLSFVRFCAVCLVNFSGKDFSVAMGGKSSKSRSFNRYSYDHSSSSQS
SARYSPYPGNHVQARTVDRVQRKYSKIGDDYHTLDQVTDALAQAGLESSNLIVGIDFTKS
NEWTGKVSFNRRSLHAIGNTPNPYEQALSIIGRTLAKFDDDNLIPCFGFGDASTHDQEVF
SFYPDNRPCDGFEEALERYREIVPHLRLAGPTSFAPIIETATGIVDNSGGQYHVLLIIAD
GQVTRSADTDHGQLSPQERVTVEAIVKASDYPLSIVLVGVGDGPWDMMRQFDDNIPSRAF
DNFQFVNFTEIMSKSIPISKKETDFALSALMEIPSQYKATMDLQILGKRRGIPARICLPP
PIKSHYSSSKHSQSSSFDQGQVNKNASSAPSESSLEDRQICPICLWQAKNLAFGCGHQTC
SECGKDLKVCPICQNQITTRIRLY
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgatagcggttcttttacctgtgcatgttttaccttattgtttccatcattttcgttcg
agtattgttggaatcgttctcttttctctctcgcatagctttaacctttttttttatttt
tattttgctccatcagctttatttgttgggggttttcctgtgatagtgatggattttgtg
aaattgaatcatctgagagggctaaagaaattttatatttctttatcgtttgtgagattt
tgtgctgtctgtttggtgaatttctctggcaaagatttcagtgttgcaatgggaggaaaa
agttcaaaatctaggagtttcaatcgctattcctacgatcacagttcctcttcacaaagt
agcgcaaggtactctccttatccagggaaccatgtacaagctagaaccgtagatagggtg
cagaggaagtactcaaaaatcggtgatgactaccacactcttgaccaggtaacagatgcg
cttgcacaagctggtcttgaatcttcgaatctgatagttggaattgatttcaccaagagc
aatgaatggacaggtaaagtttctttcaaccggcggagtttgcatgccataggaaacact
ccaaatccatatgagcaggctctatcaattataggaaggacacttgctaaatttgatgac
gataacctgattccttgctttggatttggtgacgcatctacacatgatcaggaggtattt
agtttttatcctgataaccgaccttgtgatggctttgaagaagcattagaaagatacaga
gaaatagtcccacatcttcggttggctggtccaacttctttcgcaccaattattgagacg
gccactgggattgtggataatagtggtggccaatatcatgtccttcttataatagcagat
ggacaggtaacacgcagtgctgacacagatcatggccagttaagtccacaagagcgggtc
acagtagaagccattgtcaaagcgagtgattacccattgtcaattgttttggttggagtt
ggtgatggaccctgggacatgatgagacaatttgatgacaacataccttccagggcattt
gacaattttcagtttgtgaattttacggagatcatgtcgaaaagtatccccatcagcaaa
aaggaaactgactttgcactttcagcattgatggaaatcccatcacagtacaaggctaca
atggacctccaaattctcggtaaacgaagaggaataccagcaaggatttgtctccctcca
ccaattaagagccattattcaagttcaaaacattcacaatcaagcagctttgaccaagga
caagttaataaaaatgcttcttcagctccatcagagagttctctagaagatcgtcagatc
tgtcccatttgcttgtggcaagcgaagaatctagcttttgggtgtgggcatcagacttgc
tctgaatgtgggaaggatttgaaggtctgccctatttgccaaaaccagataaccactagg
ataaggctctattga

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