Typha angustifolia (narrow-leaf cattail): 140779817
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Entry
140779817 CDS
T11061
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140779817
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
LRR_14
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
140779817
NCBI-ProteinID:
XP_072981205
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Position
3:join(504097..504548,504800..505295,505388..506167)
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AA seq
575 aa
AA seq
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MTYFPEEVVEHIFDYLVSHRDRNSVSLVCKAWYRVERSSRRSLFVGNCYSVRPERVPARF
PCVRSLSVKGKPHFADFNLVPPDWGGFAMPWIAAAARGLPDLEELRFKRMVVSDESLELL
ARSFPNLRSLVLVSCEGFSTDGLAAIATHCRLLRELDLQENEVEDRGPQWLSCFSDSCTS
IESLNFACLKGEVNAGALERLVARCPNLRSLRLNRAISVESLSKILARSPHLVDLGTGSF
TADHRSESYYMLIIALQKCKSLRSLSGFWDASPRCLPAVYPICANLTSLNLSYAPAIQGA
DLIKLIRHCWKLQRLWVLDCIGDKGLAVVASTCRELQELRVFPSDVFGAGTACVTEEGLV
AVSAGCPKLHSLLYFCHQMTNAALVTVAKNCPKFIRFRLCILEPRKPDPVTNQPLDEGFG
AIVKSCKDLRRLSVSGLLTDRVFLYIGMYAERLEMLSIAFAGDSDKGMVYVLNGCKNLRK
LEIRDSPFGDAALLADVGKYEAMRSLWMSSCDVTLGGCKALAAKMPRLNVEIIDERDEGD
EMEENLTDLHKVEKMYVYRTVGGPRNDAPHFVWTV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacttcccggaggaggtggtggaacacatctttgattacctcgtctcccaccga
gatcggaactcggtatcgttggtgtgcaaggcgtggtaccgggtcgagcggtctagtcgc
cggagtctgttcgtcggcaactgctactccgtccggccggagagggttccagctaggttc
ccctgcgtgagatctcttagcgtaaaggggaagccacatttcgctgacttcaacctggta
ccgccggactggggcgggttcgcgatgccgtggattgcggcggcggcccgtgggcttccg
gatcttgaggagctccggtttaagaggatggtggtttcggatgagagcttggagctgctc
gctcgatcttttcccaatttgcggtcgctggttctcgtcagctgcgaagggtttagcacc
gatgggctcgcggctattgctactcattgcaggctacttagggaactagatttacaggag
aatgaggtggaggatagagggcctcaatggctcagttgcttctctgattcctgtacttca
attgagtccctaaattttgcctgtctgaaaggggaggtgaatgctggagcattagagagg
ctcgtcgcaagatgcccgaacctcaggagtttgcggcttaatcgtgccatctctgtggag
tcattgtcaaagatccttgctcggtcacctcatttggtggatttgggaactggttcgttt
acggcagaccataggtctgaatcttattacatgctaataattgctctccagaaatgcaaa
tctctgaggagcctgtcgggattctgggatgcttctcctcgctgccttcctgcagtttat
cccatttgcgcaaacctgacaagtcttaaccttagctatgctcctgcaattcagggtgct
gacctcatcaaactgattcgtcattgttggaaacttcaacgtctttgggtcttggattgc
ataggggacaaaggattagcagtagtggcttcaacatgcagggagttgcaggagctgagg
gtattcccttcagatgtatttggtgcaggaactgcctgtgtgacagaagaagggctggtt
gctgtatctgcaggatgtccaaagctgcattccttgctatacttctgccaccagatgaca
aatgctgcacttgtaactgtcgcaaagaactgtccaaaatttatacgcttcagattgtgt
attcttgaaccacgaaagccagacccagtaactaaccagcccctggatgaaggttttgga
gcaattgtgaagtcctgtaaagatctaaggcgactgtcagtatcaggcctcttgacagac
cgagttttcttgtatattggcatgtatgctgaacgacttgagatgctttctattgcattt
gctggagatagtgacaagggaatggtatatgtgctcaatgggtgcaagaatctaaggaag
ttggagataagggacagcccatttggtgatgctgcacttttggcagatgttgggaagtat
gaagcaatgcgatccctttggatgtcatcctgcgatgttactttagggggttgcaaggcc
cttgcggcaaagatgccaagactcaatgtggagatcatagatgaaagggatgaaggtgat
gaaatggaagaaaaccttactgatctacataaggtggagaaaatgtatgtttatcggacc
gttggtggaccaagaaatgatgcaccacattttgtctggacagtatag
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