Typha angustifolia (narrow-leaf cattail): 140779925
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Entry
140779925 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140779925
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140779925
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140779925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_16
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf-C3H2C3
zf_RING_Vps8
RINGv
VPS18_RING_C
zf-RING_Vps41
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
140779925
NCBI-ProteinID:
XP_072981365
LinkDB
All DBs
Position
15:complement(join(2461059..2461112,2461208..2461316,2462755..2462882,2463842..2463886,2465346..2465380,2466499..2466739,2467288..2467428))
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AA seq
250 aa
AA seq
DB search
MNGNRQMEVHYINTGFPYTVTESFMDLFEGLTYAQADVALAEALQDQNNPYWSMMHTSSY
KYGFSGPGSSSYYSFGHVYDLHDYTHRLDGGRRVWDNPAPLSNVDSPQMVLHGGEAPSSS
ASSSTEECIRAHQTASSPQVFWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQECISLLPV
SKYKCRLFSRKKSRAERCVICQMDYKRGDRQMTLPCKHIYHASCVTRWLSINKACPVCFA
EVLIEEPTRQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtaaccgacagatggaggttcactatataaatactggatttccttacaccgtc
actgaaagcttcatggatttgtttgaaggccttacatatgctcaggctgatgttgctctt
gcagaagctttgcaggatcagaataacccatactggtctatgatgcatacaagctcctac
aagtatgggttttctggaccaggaagtagctcctattacagttttggccacgtgtatgac
ttacatgattacacacatagattagatggaggaaggagggtctgggataaccctgcacct
ttaagcaatgtagattcaccacaaatggttctgcatggtggtgaagctcctagttcaagt
gcaagttctagcactgaggaatgcatccgagcacaccaaactgcaagcagccctcaggtc
ttttggcaagacaatattgatcctgataatatgacctacgaggagttactagatttgggt
gaggcagttggaactcaaagccgtggtctttcccaagaatgtatttccttgcttccagtg
tcaaagtacaagtgccgcttattttcacgaaaaaaatcacgtgctgagaggtgcgtgatt
tgccagatggactacaagagaggggatagacaaatgactcttccatgcaagcatatctac
catgctagctgtgtgacaagatggcttagcataaacaaggcatgcccggtttgctttgct
gaagtactcatcgaggaaccaacgcggcaatga
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integrated database retrieval system
