KEGG   Typha angustifolia (narrow-leaf cattail): 140780059
Entry
140780059         CDS       T11061                                 
Name
(RefSeq) serine hydroxymethyltransferase 4
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang00260  Glycine, serine and threonine metabolism
tang00460  Cyanoamino acid metabolism
tang00630  Glyoxylate and dicarboxylate metabolism
tang00670  One carbon pool by folate
tang01100  Metabolic pathways
tang01110  Biosynthesis of secondary metabolites
tang01200  Carbon metabolism
tang01230  Biosynthesis of amino acids
tang01240  Biosynthesis of cofactors
tang04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tang00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    140780059
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    140780059
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    140780059
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    140780059
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    140780059
Enzymes [BR:tang01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     140780059
SSDB
Motif
Pfam: SHMT BRCA2
Other DBs
NCBI-GeneID: 140780059
NCBI-ProteinID: XP_072981470
LinkDB
Position
3:complement(join(1682969..1683213,1683902..1684003,1684084..1684474,1685278..1686102))
AA seq 520 aa
MFTVPLLPIYPPFHSSPLRVLHSTRFLSPSPPPPLSSRFLLRPPVSAAAMDSVASWGLTP
LSSADPEIHDLIEREKHRQSHGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGG
NEFIDQIENLCRDRALAAFHLDPAKWGVNVQPYSGSPANFAAYTAILNPHDRIMGLDLPS
GGHLTHGYYTAGGKKISATSIYFESLPYKVSPVTGFLDYEKLEEKALDFRPKLIICGGSA
YPRDWDYGKFRSIADKCGAMLLCDMAHISGLVAAQEAANPFEFCDLVTTTTHKSLRGPRA
GMIFYRKGPKPPKKGQPEGAVYDYEDKVNFAVFPSLQGGPHNHQIAALAVALKQATTPGF
KTYAKQVKANAVALGNYLMSKGYKMVTDGTENHLVLWDLRPIGLTGNKVEKLCDLCNITL
NKNAVFGDSSALSPGGVRIGAPAMTSRGLVEKDFEQIAEFLHQAVTICLSIQKEHGKLLK
DFNKGLVNNKDIENLKAAVEKFASSFDMPGFQMSEMKYKD
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgttcaccgtacccctccttcctatatatccccccttccattcttctcctcttcgcgtc
ctccactccactcgcttcctctctccttctcctcctcctcctctctcctctcgcttcctc
ctccgtcctccagtctccgccgccgccatggattccgtcgcttcttggggcctcacccct
ctctcctccgccgacccggagatccacgacctcatcgagcgcgagaagcaccgccagtcc
cacggcatcgagctcatcgcctccgagaacttcacctccttcgccgtcatcgaggccctc
ggctctgccctcaccaacaagtactctgagggtatgcccggcaaccgctactacggaggc
aacgagttcatcgaccagatcgagaacctctgccgcgaccgtgccctcgccgccttccac
cttgacccggccaagtggggggtcaacgtccagccctactccggcagccccgccaacttc
gcggcgtacaccgcgatcctcaacccccatgatcggatcatggggcttgatctcccttcc
ggcgggcacttgactcatgggtactacacagctggggggaagaagatctcggctacctcg
atctatttcgagagcttgccatacaaggtgagcccggtgacggggttcctcgattacgag
aagttggaggagaaggcgttggatttccggccaaagctcatcatttgcggggggagtgcg
tatcccagggattgggactatggaaagtttagatccattgcggacaagtgtggggcgatg
cttctttgcgatatggcgcacatcagtggcttggtggccgcgcaggaagctgcaaaccca
ttcgaattctgtgacttagtgaccaccacgactcacaagagtcttagaggaccaagagct
gggatgatcttttacaggaagggacctaagcctcccaagaagggccagccggagggtgct
gtgtatgactatgaggataaggttaactttgctgtgttcccatcacttcaaggtggtcct
cacaatcaccaaattgcagcactggcagtggccttgaaacaggccacaacacctgggttc
aagacctatgccaagcaggtcaaggccaacgcagtcgcccttggaaactatctgatgagc
aaaggctacaaaatggttactgatggcactgagaaccatctcgtcctctgggatctccgt
cctattggcttgactggaaacaaggttgagaaactctgtgatttgtgcaatattactttg
aacaagaatgctgtctttggggacagcagcgcattgtctcctggtggtgttcggattggt
gcccctgcaatgacatcaaggggtttggttgagaaggacttcgagcagatcgccgagttc
cttcaccaggcagtcaccatttgcttgagcatccagaaggagcatgggaagctcctcaag
gacttcaacaagggattggtgaacaacaaggatattgaaaatctcaaggctgcagttgag
aagtttgcctcctccttcgacatgcctggcttccaaatgtctgagatgaagtacaaggat
tag

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