Typha angustifolia (narrow-leaf cattail): 140780129
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Entry
140780129 CDS
T11061
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04142
Lysosome biogenesis
tang04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
140780129
04148 Efferocytosis
140780129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140780129
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140780129
Hops complex
140780129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
140780129
NCBI-ProteinID:
XP_072981582
LinkDB
All DBs
Position
3:join(5714794..5715015,5725424..5725597,5725909..5726229,5726358..5728133,5731379..5731735)
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AA seq
949 aa
AA seq
DB search
MILWGKFDFFEEKSGGKASIPAEITGKIQCCSSGRGRIAVGCDNGTVGLLDRSFKLSFGF
QAHASNVLFIQQLKQRNFLMTVGDDEQISSQTSSMCLKVFDLDKVQEESSSTTTPFCTQI
LRIFTNQYPEAKITSFLVLEEAPPILLVAIGLDSGSIYCIKGDIARERITRFKLQIETVD
GISSSITGLGFRVEGRALHLFAVTPSSVTMFSLHDQPPKRHTLDQIGCETNAVTMSDRLD
LVIGRPEAVYFYEVDGRGPCWAFDGEKKFLGWFRGYLLSVIEDQRSSKNTFNVYDLKNRL
IAHSMAVGEVSHLLCEWGYIILIMSDKRVLCIGEKDMESKLDMLFKKNSYTVAINLVQSQ
QADPAATAEVLRKYGDHLYKTQKYDEAMSQYINTIGHLEPSYVIQKFLDAQRIYNLTNYL
ENLHDQGLGSKDHTTLLLNCYTKLKDVEKLNKFIKDEDGVGELKFDVETAIKVCRAAGYH
EYAMFVARKAGRHEWYLKILLEDLGRYHEALQYISSLESNQAGVTVKEYGKILVEHMPVE
TVEILLKLCTDGGESTSKRASNGMYLLMLPTPMDFVNIFVHSPQCLMDFLEKYISKVKDS
PAQIEIHNTLLELYLSNDLSFPSVSQENGVENHDVKARSSTGVAIGYNENKEKSYLDKKD
AKKEKNRVERQQKGLGLLKSSWTSEMEHPLYDVDLAVILCEMNAFKDGLLFLYEKMKLYK
EVIACYMQAHDHEGLIACCKKLGDSSQGGDPSLWGDLLKYFGELGEDCSKEVKEVLTYVE
RDDILPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRRSIEKDQEETNVMKKE
IEDLKTNAKIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSIIE
KKRSLEQNARDQDLFFQLLKSSKDGFSVIADYFSKGIVSKTTIAPPENS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttgggggaaattcgacttcttcgaggagaaatccggcgggaaggcctccatc
cccgctgagatcaccggcaagatccagtgctgctcctccggcaggggccggatcgccgtc
ggatgcgacaacggcaccgtcggactcctcgatcgcagttttaagctctcctttggattc
caagcccacgcctcaaatgttctcttcatccagcagctcaagcaaagaaatttcctcatg
actgttggagatgatgagcagatatcttctcaaacatcttctatgtgtttaaaggttttt
gaccttgataaggtgcaagaagagagttcaagcacaacaactcctttttgtacccaaata
ttgcggatattcaccaatcaatatcctgaagcaaagattacatcctttttagttcttgag
gaagcccctccaattttgctggtagctattggcttagattctggttctatctactgcatt
aaaggtgatattgcacgtgaacgaattacacgcttcaagctacagattgagactgttgat
ggtattagttcctctattactggtcttggtttccgagttgaggggagagctcttcacctc
tttgcagtaactcccagttctgtaactatgttcagcttgcatgatcaaccaccaaagaga
cacacccttgatcagattggttgtgagaccaatgctgtcacaatgagtgaccgcctggat
ctggttattggacggcctgaagctgtgtacttttatgaagttgatggtcgaggtccttgt
tgggcttttgatggtgagaagaaatttcttggctggtttcgtggatatttactctctgtt
attgaagatcaaaggagcagcaaaaacactttcaatgtctatgatctgaagaatcggttg
attgcccatagcatggctgttggtgaagtttctcacttgctatgtgagtggggctatatt
attctcataatgagtgacaaaagggttctttgcataggagagaaagatatggaaagtaag
ctggatatgttgttcaagaaaaattcatatacggtagcaattaaccttgtgcaaagtcag
caagctgatcctgctgctactgctgaagtgttgcgaaaatatggtgaccacttgtataag
actcaaaaatatgatgaggctatgtcccaatatattaacaccattggtcatcttgaacca
tcatatgtcatccagaaatttttggatgcacaacgtatctacaacctcactaattatcta
gaaaacttacatgatcagggattaggctctaaagaccatacaactcttcttctgaattgc
tataccaaattgaaagatgtagaaaagctaaacaagtttatcaaagatgaagatggcgtg
ggcgaacttaagtttgatgtggaaactgctataaaagtatgccgagctgctggatatcat
gaatatgccatgtttgtggctagaaaagctgggaggcatgaatggtacttgaagatttta
cttgaggatcttggaagataccatgaggccttgcaatacatatctagtcttgaatccaat
caagctggtgtgacagtgaaagagtatggtaagattcttgtagaacatatgccagttgaa
actgttgaaatactgctgaagctctgcactgatggtggtgaatcaacaagtaagagagct
tcaaacggcatgtacctacttatgcttccaacacccatggactttgtcaatatatttgta
catagcccacaatgtcttatggattttttagaaaagtatatcagcaaggtcaaggattca
cctgctcagatagaaattcacaatacacttttggagctttacctatctaacgacttgagc
tttccatcagtctcacaagaaaatggtgttgaaaatcatgatgttaaagcaagaagctct
acaggagtagccattgggtataatgagaataaagagaagtcatatttggataagaaagat
gccaagaaggagaagaaccgggtagaaagacagcagaaagggcttggcttgctcaagagc
tcatggacatcagaaatggaacatcctttgtatgatgttgatcttgcagttattctttgc
gaaatgaatgcattcaaagatggtctgttgtttctgtatgagaaaatgaaactctataaa
gaagtgatagcttgctacatgcaggcccatgaccatgaaggtctgattgcctgctgcaaa
aagctaggagactcatcccaaggtggtgatccatctctgtggggtgatctgttgaagtac
tttggtgagctaggagaagattgttcgaaagaagtaaaggaagtattgacttatgttgag
agggatgatatcttgcctcctattgttgtactgcagacattatctaagaacccgtgcctg
acactctctgttgttaaggattacattgctcgaaagcttgaacaagaatcaaagctaatc
gaagatgaccgcagatctattgagaaagaccaggaagagacaaacgtgatgaagaaagag
atagaggacctcaagactaatgccaagatctttcaacttagcaagtgcactgcttgcact
ttcacccttgatcttcctgcagtccattttatgtgcatgcactcttttcacctcagatgc
cttggagacaatgagaaagaatgcccagagtgtgcacctgaatacagatctatcatagag
aagaaacgaagcttggagcagaatgccagagaccaggatctcttcttccaattgttgaag
agttcaaaggatgggttttctgtcattgctgactactttagtaagggcatagtaagtaaa
actactattgcaccaccagaaaattcttga
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