Typha angustifolia (narrow-leaf cattail): 140780139
Help
Entry
140780139 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13144
integrator complex subunit 7
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140780139
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
140780139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
Arm_vescicular
Motif
Other DBs
NCBI-GeneID:
140780139
NCBI-ProteinID:
XP_072981596
LinkDB
All DBs
Position
3:complement(join(154877..155423,155867..157938,158059..158262,158727..158834,159796..159981,160147..160589,165120..165254,165616..165691))
Genome browser
AA seq
1256 aa
AA seq
DB search
MEKIPAACAMEWSIELEKGLRSKNPVRSSAPFEHLESVRIYRDFKRALDALRQPFQCPAD
FSSFPFGIQSCQRIMAIEQIGPKLQQWSMESNISMGVSRMYELVPGEDRTFANTIILRLA
DAFRYGDNNTRSCILKVFLLEMRNLFKKGKRYNGILAKQRVPNYVELLKRVKIVYDTRDR
EAKVLALRLFGCWADLAKDSAQIQYAILASLHAPHASEVKAALFAAGCLCRLSEDFACII
LKVLVNLLSSSGVPADVMVTAVRAFSNLQCTASIIWRAYKAGKRLVLGSLNAEFRADMLS
SLSKLAVKSIILVAEQVDLLLSVLKDKSASPQKDRALKCLYFLFSGGACHFPVNKDVCNA
LFSIMKDENLPLNFHCRALMILQKIYGTILPNLPYVDVPDLPRLILMVESTMHSRARLRT
RLALHLLVDILCSLRRPWEEHLSAPTSEWGPTVFQLQGISESTALGSDKNDPLLLACRVT
TLAIDQNISLVEQLMIESNEEEVNMEIRDSCGDLNKEYKALFGLIWKLAEYYPSSAIAAV
SKIRCLIQTLGSMHDRFGIQSPGIIKNECGSLCREASQMEVDVNKPNPVSRSEESHHKKQ
SFAVSELIISTCRFANACLNILNDIGVVNCYPVVKLLIECIQQTTSYYWDTYEIFCLRMH
SLIAYNSRRITSDSQQDLDESNLHPISGFFHPGFWVVQELHALEFSKKMVRKRNYWIAYR
AGKYSCCEGLWFTATFVFRKLVDVVLSNSFSCWFKSLMLFAGGESEIKLLLFPRAGIELI
NKLQREDDSEKELSCAEIDKRCNFDSNADLHDCEGKLASVCSRICLSEETLASSGASDGV
YYFQRWFITLRVKFLNILMEMIGLVLNRGEENVRFHFLTDRKYTHTIVLGLANISSRFNM
LAKDYDLLTTSFPDIDHRSFRSISRLALNCSLLAFCTAFALDFSLSPTFETVMPCSTRKK
LSGLPVLQDLLERLWGIDSTTAVQVQQFMTIYSEQMEFFQSRPQVNCSGHMERDFVLVCQ
FAIPGLICIREDSKGVTDEEDLQSLYNRGLQLLSDTMVKLMELPFQVPRYFFRVRPCIGA
ELFVFDTDSRNKSEISISPGFQLSLSLCIQLKNVLASFSIRVTKLYCILAAKRSCCLTTE
AGKRDDGQHLGDFQFHESEEMVELNAMLLRHIKADTGKTSAVGVENGYVDFVTTCVQFEV
NEKLQGFSACLLNVSAFPEGSYQIKWHSCCIDANGNCWSLLPLNTGAAFSIRKTSL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattccggcggcgtgcgccatggagtggagcatcgagctcgagaagggcctc
cgctctaagaaccctgtgcgatcgagcgccccgtttgaacacctggaaagcgttcgcatt
tacagagacttcaaaagggcattggatgcgctccggcagccattccaatgccccgcggac
ttttcaagttttcccttcggaattcagtcttgtcaacgcattatggcaatagaacagata
ggtcctaaacttcaacagtggagcatggaatcaaacatcagcatgggagtatcaagaatg
tatgagttggtaccaggggaggacaggacatttgccaacacaatcattcttcgactagcc
gatgcatttaggtacggggataacaacacaagaagttgtatactgaaagttttcctcttg
gagatgagaaacctgttcaagaagggcaaaaggtataatggtattctggcaaagcagagg
gtgcctaattatgtagaactactcaaaagagtaaaaatagtttatgacacacgtgatcgt
gaggccaaagttttggctttgcgtctttttggttgttgggctgatcttgcaaaagacagt
gctcagatacaatatgcaattctcgcaagcttgcatgctccacatgcttcagaggttaag
gcagcattgtttgctgctggttgcttgtgtcgactgtcagaggattttgcatgcataatt
ctcaaggtattggtaaaccttcttagttcatcaggggtacctgctgatgtgatggtgaca
gcagttcgtgctttctcaaacctgcaatgcacggcatcgattatttggagagcttataag
gctggaaagaggctggtgctgggttcactgaatgctgagtttagagctgacatgctgtca
tctctatcaaagttggctgtcaaatcgatcatattagttgctgagcaggtagacttactc
ttatcggttctaaaggacaaatctgcttctccccaaaaggatagagctttgaaatgctta
tactttttgtttagtggaggtgcctgccattttcctgtcaataaggatgtatgtaatgca
ttattcagtatcatgaaggatgaaaatcttccactaaatttccattgcagagctttaatg
attttgcaaaagatatatggcactatactaccaaatctaccttatgttgatgtgcctgat
ttacctaggcttattctgatggtagaaagtacaatgcactctcgtgcgaggttaaggacg
cgtctcgctcttcacctacttgttgatatcttgtgcagcttaaggagaccatgggaagag
catctctctgctcctaccagtgagtggggtcccacagtctttcagttacaagggatttca
gaatcaacagcattgggttctgacaaaaatgacccattgcttcttgcctgccgagttact
acactagctatagatcaaaatatatctctggttgagcagttgatgattgaatccaatgag
gaagaagtaaacatggagattagggactcctgtggggatctaaataaagaatacaaagcc
ttatttggtcttatttggaaacttgctgaatactatccttcttctgctattgctgcagtg
agtaaaataagatgtctgatacaaacactaggaagtatgcatgacagatttggcattcaa
tctcctggtattataaaaaatgaatgtggttctctttgtagggaagcttctcaaatggaa
gtggatgttaataagccaaatcctgtttcaagatctgaagaatctcatcacaagaagcaa
agttttgctgtttcagaacttatcatatctacttgcaggtttgcaaatgcttgtctcaat
atccttaatgatataggtgtagtcaactgttatcctgttgtgaagcttttaattgagtgc
atacagcagactacatcttattattgggatacttatgaaatcttttgtcttcgtatgcat
tctttaattgcatataatagtagaagaataactagtgacagtcaacaggatttagatgaa
tcaaatcttcatcccatatcaggattcttccatcctggcttttgggttgttcaggaacta
catgcactagaatttagtaaaaagatggtgagaaaaaggaattactggatagcttacaga
gctggaaagtattcttgttgtgagggtctgtggtttacagcaacatttgtctttcggaaa
ttggtagatgttgttctgtcaaattcctttagttgctggttcaaatctttgatgcttttt
gctggtggtgaaagtgaaataaaactactactctttcctagagcaggtatagagttgata
aataaactgcagagagaggatgatagtgaaaaagaacttagttgtgcagaaatagataag
cgctgcaattttgattcaaatgcagatttgcatgattgtgaaggaaaacttgctagtgtt
tgtagcagaatatgtttgtcagaggaaactttggcatcaagtggagcttcagatggcgtc
tactatttccagaggtggttcatcactcttagagtcaagttcctcaatatcctgatggaa
atgattggactcgtccttaatagaggtgaagaaaatgtgagatttcattttctcacagat
agaaagtatacacacactattgtacttggtttggctaatatttcttcaaggtttaatatg
cttgctaaggactacgatcttcttacaacatcatttccagatattgaccaccgaagtttt
agaagcatctccagactagctctcaattgctcactgttggcattttgcactgcttttgcc
ctggatttctcattatcacctacttttgagactgtcatgccctgcagtacaaggaaaaag
ctttccggtcttcctgttttacaagacttacttgagcgattgtggggcatcgatagcaca
actgctgttcaggttcagcagtttatgactatctattcggaacaaatggaattcttccag
tcaagaccacaagtcaattgctctggtcacatggagagggattttgtattggtttgtcag
tttgctataccaggtttgatctgcatacgggaagattcaaaaggggtgacagatgaggaa
gatctgcaatctctttataaccgaggactgcaacttttatctgacactatggtgaagttg
atggaactgcctttccaggttcccaggtacttcttcagagtaagaccttgcattggtgcc
gagctctttgtatttgatacagactccagaaataaaagtgaaatatcaatctcacctggt
ttccagttgtctctaagtctttgcattcagttgaagaatgtgttagcaagtttttccata
cgggtcactaagctgtattgcattctcgctgcaaaacgatcttgctgcttaaccactgag
gcaggaaaaagggatgatggccaacatcttggggattttcaatttcacgagagtgaagaa
atggttgaattaaatgccatgttactgaggcacataaaggcagacactggaaagacaagt
gctgttggtgttgaaaatggctatgttgattttgtgacaacctgtgttcagtttgaagtt
aatgaaaaactgcagggattctcagcttgcttgctaaatgtttcggctttcccggaaggt
tcatatcaaattaagtggcacagctgttgtattgacgccaatggcaactgttggagctta
ctgcctctgaatactggcgcagccttttcaattaggaaaacttctctttga
DBGET
integrated database retrieval system
