KEGG   Typha angustifolia (narrow-leaf cattail): 140780165
Entry
140780165         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
tang03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140780165
   03015 mRNA surveillance pathway
    140780165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140780165
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     140780165
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 RRM_occluded
Other DBs
NCBI-GeneID: 140780165
NCBI-ProteinID: XP_072981658
LinkDB
Position
3:join(7139489..7139691,7140857..7140925,7141660..7141748,7142503..7142549,7142639..7142719,7142808..7142973,7143252..7143498,7143564..7143629,7144366..7144485,7145106..7145175,7145295..7145332,7145858..7145927)
AA seq 421 aa
MAKPGRGRRASRSGSASGSSSRSRSSSGSDSRSRSRSRSRSRSFSSSSSSPSRSASSRSR
SPPPRRRSPPGAARRGRSPSPPPPKKASPPRKTSPVPESVVLHIDHLSRNVNEAHLKEIF
SNFGEIVNVELTMDRIVNLPRGYGYIEFKKRVDAEKALLYMDGGQIDGNVVRVKFTLPQR
QKASPPPKTVPVAPAREAPQRDKVGPNAEKDAQMRPRESSPRRKPLSPPRRRSPPANRKV
DSPKRRTDSSPRRRPESPVRRRPASSPVRRGETPPPRRRVGSPPRRRSPSPAPRRNRSPA
RISPRRGRGSPVRKRSPMPPRRRSPPPRRVRSPPRRSPPPRRRSRSPIRRPARSRSRSIS
PRRGRAPPLRRGRSDSSYSGSPSPRKGARRVSRSRSPRRPARGRSSSNSGSSSSSPSPKP
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgaagcccggtcgaggtcgtcgggcctctcgctcggggtctgcgtccggctcctcc
tcccggtcgcgctcttcctccgggtcggactcccgctcgaggtcgcgatcccggtcccga
tccaggtccttctcctcctcgtcctcctctccctcgcgaagcgcgagctcccggagccga
tcgcctccgccgcggagaagaagcccacctggagcagcgaggcgaggtcgttcaccatca
ccaccacctcctaaaaaagcttcaccccctaggaaaacatccccagtacctgagtctgtt
gttctccacattgatcatctatccaggaatgtcaatgaagctcatctaaaagaaatattc
agcaattttggtgaaatagttaatgtggagctgacaatggaccgcattgttaaccttcct
cggggatatggatatattgagttcaagaagagggttgatgctgaaaaggctcttctttat
atggatggtggtcaaattgatggaaatgttgtccgagtaaaatttacattaccacaacgc
caaaaggcttctccccctccgaagactgttcctgttgctccagcaagggaagctcctcaa
agagataaagttggtccaaatgctgaaaaggatgctcaaatgcggcctagggagtcttcg
ccacgacggaaaccactgtcacctccacggagacgatccccacctgcgaatcgaaaagtt
gattcacccaagcgtcgaactgattcctcccctcgacgacgccctgaatcccctgttcga
cgaaggccagcttcttctccagttcgacgtggtgaaacaccaccacctcggcggcgggtt
ggatctcctcctaggagacgttcaccttcccctgctcctcgaaggaacaggtcacctgcg
cggatttctcctagaagaggtcgtggcagtccggtccgcaagcgctccccaatgcctcca
agaaggcgatcaccacctccaaggcgagtcagaagtcctccaagaaggtcacctcctcct
cgccgtcgtagccgatcacctattcgtaggcctgctcgatctcgttccagatcaatatct
cctcgcaggggtcgagcaccacctctgaggcgtggaaggtcagattcatcatattctgga
tcaccaagccctcgaaagggagctagaagagtatcgaggagtcgcagtcccagaagacct
gctcgaggaagaagctccagtaatagtggcagcagcagcagctcaccttctcctaaacct
agttag

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