Candidatus Thiothrix anitrata: J8380_00030
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Entry
J8380_00030 CDS
T07878
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J8380_00030 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tani03019
]
J8380_00030 (recQ)
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_00030 (recQ)
Enzymes [BR:
tani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J8380_00030 (recQ)
Messenger RNA biogenesis [BR:
tani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J8380_00030 (recQ)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J8380_00030 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QTR51699
LinkDB
All DBs
Position
4499..6331
Genome browser
AA seq
610 aa
AA seq
DB search
MQRAYHILNNTYGYADFRLNQRDIIGSLLQAHDVLALMPTGGGKSLCYQIPALVRDGVGI
IVSPLIALMQDQVDALLQLGIRAAYLNSTLNFGAVQRVERELLAGEIDLLYVAPERLLSE
KMLPLLERLHSNVGISLFAIDEAHCVSQWGHDFRPEYQQLSLLAERFPGVPRIALTATAD
QRTRQEIIEQLRLQRADIYVNSFDRPNIHYTIQQGQQARQQLWQFIDAHHSQDAGIVYCL
SRKKVEDTAAWLAQQGRTALPYHAGMDADTRRNHQQRFLREEGVIIVATIAFGMGIDKPD
VRFVAHLSLPKSIEAYYQETGRAGRDGLPANAWMAYGLQDVITLRQMMLESTASEQQKRI
EHHKLQAMLGLCEMTTCRRQALLSYFGEPTPQPCGNCDNCRNPPEVWEAAVAAQKALSCV
YRTGQRFGVNYIIEVLLGKDDERIRQFRHEQLSTFGIGKEHSEAEWRNIFRQLIALGYLT
VDVDGHGGLRLTDNARPLLRGEIELHLRKEQKRERVRRDRVRGDPVAKPRFNRDTMPIEV
EALWEALRALRLRLAQEQGVPPYVIFHDSTLLQMADERPQTLEAMRGIAGIGERKLAQYG
QAFLEVVLGA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgcctaccacattctcaacaatacctacggctacgccgattttcgcctgaac
cagcgcgatattatcggctcattgctgcaagctcatgatgtcctcgcgctgatgcctacg
ggcggcggcaaatcgctgtgttaccagattccggctttggtgcgcgatggcgtgggcatt
atcgtgtcgccgctgattgcgttgatgcaggatcaggtggatgcattgctgcaactcggc
attcgagcggcttacctcaattcgacgctgaacttcggtgcggtgcagcgggtggaacgc
gaattgctggcaggtgaaatcgacctgctttatgttgcgcctgaacgcttgctcagcgaa
aaaatgctgcccttgctggaacgtttgcattccaacgttggtatcagcctgttcgctatc
gacgaagcgcattgtgtgtcgcaatgggggcatgatttccgcccggaatatcagcaattg
tcgctgctggcggaacgtttccccggtgtgccacgcattgcactgacggcgacagcggat
cagcgtacccgtcaagaaatcattgagcagttgcgtctgcaacgcgccgatatttacgtc
aatagctttgaccgcccgaatatccactacaccatccagcagggacagcaagcgcggcaa
caattgtggcagtttatcgacgcgcatcattcgcaggatgccgggattgtgtactgcttg
tcgcgcaaaaaggtcgaagacaccgccgcatggctggcgcaacaggggcgcaccgcgttg
ccgtatcacgcggggatggatgcggatacgcgccgtaatcaccaacaacgtttcctgcgc
gaagagggcgtgatcatcgttgctaccattgcgttcggcatgggtatcgacaagccggat
gtgcgtttcgtggcgcatttgagcctgccgaaaagcatcgaagcctactatcaggaaacc
gggcgagcggggcgcgacggtttgcccgcgaatgcgtggatggcgtatggcctgcaagat
gtcatcactttgcgccagatgatgctggaatccaccgccagcgagcagcaaaagcgcatc
gaacaccacaagctgcaagccatgttgggcttgtgcgaaatgaccacctgccgccgccaa
gcgttgttgagctactttggtgaacctacaccgcaaccgtgtggcaattgcgataattgc
cggaatccgccggaagtgtgggaggcagcggtggcggcgcaaaaagccttgtcgtgcgtg
taccgcaccgggcagcgtttcggggtgaattacattatcgaggtgttgctgggcaaggat
gatgagcgcatccgccagtttcgccacgagcagctttccacttttgggattggcaaggaa
cattcggaggcggaatggcgcaatattttccgccaattgattgcgctggggtatttgacg
gtagatgtcgacgggcatggcggcttgcgtctgaccgataacgcccgcccgttattgcgt
ggggaaatcgagctgcatttgcgcaaggaacagaagcgcgaacgggtgcggcgtgatcgt
gtgcggggtgatcctgtcgccaaacctcggtttaaccgcgataccatgcccattgaggtc
gaagccttgtgggaagccttgcgtgcgctgcgactacgcttggcacaggagcagggagtg
ccgccgtatgttattttccacgattccaccttgctgcaaatggcggatgaacgcccgcaa
acgctggaggcgatgcggggtattgcggggattggggagcgtaagttggcgcagtatggg
caggcgtttttggaggtggtgttgggggcgtga
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