Candidatus Thiothrix anitrata: J8380_00340
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Entry
J8380_00340 CDS
T07878
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J8380_00340 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_00340 (recC)
Enzymes [BR:
tani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J8380_00340 (recC)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8380_00340 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QTR50071
LinkDB
All DBs
Position
complement(70142..73288)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLYLHQSNQLERLAQHFAALQRIDPLSPLTHEMVVVQNSGMGRWLSLQTARFNGISANIR
YLFPAEMTWELLRAVLSDVPEKDPCAPASLRWRLLTVFLQEPDEWPELNHYLATGAAGAW
QLAGQIAKVFDQYLFFRPDWIREWEATSTPLSQRGDSSLSEVEGWQQRLWWRVAGAQKLP
HWVRLQARFAAAMQQGEHTGSPLPTRISFFSVPVLSPGYVQLLTQVAQYIDIHVYLMNPS
IEYWGDIESEKRRRKQSPEAQALTTVGNPLLASWGRQGRDFLDQLLEANAETDDTLFVLS
PSTPCGGRVGEGGGCPTLLQQLQADILHLRMPESLPPANHSSIAFHSCHSPLREAEVLYQ
QLVVLLSKNESLTPADIVIMMPDIDTYAPYLEAVFATADPPLPYSIADGSPRFTQGMLNL
CQQLLGLPQTRCDVESVLALLEFEEVREHLAMDEAQVMQCRAWMRAVNVRWGADTRMRDA
QGGAVTLEHTWRYGLDRLLLGYALPGADLFADVLPFNDIEGSLALLLARLQQLLDAVLGL
AAWQGQTHPLAVWDQRLRQVLHAVVGETANLSMVWQALDQLKKTVTQAGFAEPLAWEIFQ
AALLEQLDKRSEADGFLGRGITFCALMPMRTVPFRFVGIIGMNDGVFPRRDTRASFDRMG
LQVRRGDRLKRDEDRYLFLESVLSAREWLYISYVGQSQQDNSELPPSVLVSELLDYLERC
GATRNALITKHRLQEWENTLGAGGDGEAVWGGESWQFLPPPDSNYRQLTLSDLIRFYQHP
ARYFLQERFGLRLGERDESLPVREPFELEKFSDATLREVIFQCVSRGQAAETALPLLRAQ
GLLPHGTPGALLFGREVSVTQDFFERVQPLPVLQQQSFYLELGEFSLSGVLGQLDSSGRR
EYVLGKLSYWQWLGIWLQHLVLNVLSESTYGRHTQVLSVEKDVQLLPVTDAAAQLEQLLA
WYWRGLQQPLAFFPKTAFEMAKLDAPTPAQATTKWESSYGYAGEGDKPEYRLLYRHENPL
ETHWDEFLEITQGLFKAMLGHSAPLAVP
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctttacctacaccaatccaatcagttagaacgccttgcacagcatttcgccgctctt
cagcggattgatccgttgtcgccattaacccatgaaatggtggtggtgcaaaacagcggc
atggggcgttggttatcactacaaacggcgcgttttaacggtattagcgcgaatatccgc
tatttgtttcctgctgaaatgacgtgggagttattgcgggcggtattgagtgatgtgccg
gaaaaagacccgtgtgcgccagcgagtttgcgttggcgattgttgacggtgtttttgcaa
gaaccggatgagtggccggagttaaaccattatctcgcgacgggtgcagcgggtgcttgg
caattggcgggacaaattgccaaagtgtttgaccaatacctgttttttcgcccggactgg
attcgggagtgggaagcgacttcgactccgctcagccagcgaggggatagctccctgagc
gaagtcgaagggtggcaacaacgactgtggtggcgtgttgcaggtgcgcaaaaactgccg
cattgggtgcgcttgcaagcacgtttcgccgccgctatgcagcagggtgaacatacaggt
tcgcctctacccacgcgcatcagctttttttctgtgccggtgttgtcgcccggttatgtg
caattgctgacgcaggtagcgcaatacatcgacattcacgtgtatttgatgaatccaagt
attgaatactggggtgatattgagtccgaaaagcggcggcgtaaacaaagcccggaagcg
caagcactgaccacggtggggaacccgttactggcttcgtggggcaggcaggggcgggat
ttcctcgatcaactgctcgaagccaatgcggaaactgacgacactttgtttgttctttct
ccctccaccccttgcggggggagggttggggaggggggggggtgccccaccttgttgcaa
caactacaagctgacatcctgcatttgcggatgccggaatcattgccacctgctaaccat
tcttctatcgccttccattcctgccattcccccctacgtgaagccgaagtgctctaccaa
cagcttgtggtgttattgagtaaaaacgagagcctaacgcccgccgatattgtcattatg
atgcccgatattgacacttacgcgccgtatttggaggcggtatttgccacggctgatcca
cctttgccgtacagcattgctgatggcagcccgcgttttacccaaggaatgctaaatctg
tgtcagcagttgttaggtttgccgcaaactcgctgcgatgtggaaagcgtgctggcgttg
ctggaatttgaggaagtgcgcgaacatctggcgatggatgaagcgcaagtgatgcagtgt
cgggcatggatgcgggcggtcaatgtgcgttggggtgcggatacgcggatgcgcgatgcg
caaggtggagcggtaacgctggagcatacttggcgatacggcttggatcgcttgttgctg
gggtatgcattaccgggggcggatttatttgcggatgtactgccgttcaacgacattgag
ggtagtcttgcgttgctgttggcgcggttgcaacagcttttggatgcggtgttggggtta
gccgcttggcaggggcaaacccacccgctggcggtgtgggatcagcgtttacgtcaagta
ttgcacgcggtggtgggcgaaactgccaacctgtcaatggtgtggcaggccttagatcag
ctcaagaaaaccgtgacgcaagccggttttgcggagccgttagcgtgggaaatcttccaa
gcggcgttgctggaacaattggataaacgcagcgaagcggatggctttttggggcgcggc
attactttttgcgcgttgatgccgatgcggactgtgccgtttcgtttcgtgggcattatt
ggaatgaatgatggggtgtttccgcgtcgtgatacccgtgcgagttttgaccgtatgggg
ttgcaagtgcgacgcggtgatcgtttgaaacgcgatgaagaccgttatttgtttttggaa
agcgtgctgtcagcgcgggagtggttgtacatcagctatgtggggcaaagtcagcaggat
aatagcgaattgccgccgtcggtgttagtcagcgaattgctggattatcttgaacgttgt
ggcgcgacacgcaacgcgttgattacgaagcatcgtttgcaggagtgggagaatactttg
ggggcggggggggacggcgaggctgtatgggggggcgaaagttggcagtttcttcccccg
cccgactctaactaccgccaactcaccctgtctgatttaatccgtttttaccaacatcct
gcacgttactttttgcaggagcgtttcgggttgcgtttgggcgaacgcgatgaaagtttg
ccagtgcgtgaaccgttcgagctggaaaagtttagcgatgcgaccttgcgtgaagtaatt
ttccagtgcgtgagtcgcgggcaggcagcagaaaccgccttgccgttgttgcgggcgcag
ggtttattgccgcacggtacgccgggtgcgttgttatttgggcgtgaagtgagtgtgact
caagactttttcgagcgggtgcagcccttgccagtattgcaacagcagtctttttatctg
gagttgggtgagttcagtttgagtggggtgttgggtcagttggatagcagcgggcggcgc
gaatacgtattgggtaaattgagttactggcagtggttagggatttggctgcaacatttg
gtgctgaatgtgttatccgaatccacctacgggcgacacacgcaggtgttgagtgtggaa
aaagatgtgcagttactgcccgtcaccgatgccgcagcgcaattggagcaattgctggct
tggtattggcgtggtttgcagcagccgctggcgtttttcccgaaaacggcatttgaaatg
gcaaagctggacgcgcctacccctgcgcaagcaaccaccaagtgggaaagcagttatggt
tacgcgggtgagggcgacaagcctgagtaccgtttgttatatcgccacgaaaacccgctc
gaaacccactgggacgagtttctggaaatcacccaaggattgtttaaagcgatgttgggg
cattctgctcccctcgccgttccctga
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