Candidatus Thiothrix anitrata: J8380_01375
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Entry
J8380_01375 CDS
T07878
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03030
DNA replication
tani03430
Mismatch repair
tani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J8380_01375 (dnaX)
03430 Mismatch repair
J8380_01375 (dnaX)
03440 Homologous recombination
J8380_01375 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tani03032
]
J8380_01375 (dnaX)
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_01375 (dnaX)
Enzymes [BR:
tani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J8380_01375 (dnaX)
DNA replication proteins [BR:
tani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J8380_01375 (dnaX)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J8380_01375 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_18
ResIII
AAA_2
AAA_30
AAA_assoc_2
AAA_19
TsaE
Mg_chelatase
DUF3646
nSTAND3
Adeno_E1B_55K_N
TniB
RsgA_GTPase
AAA_24
zf-CXXC
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QTR50264
LinkDB
All DBs
Position
273244..274872
Genome browser
AA seq
542 aa
AA seq
DB search
MSYQVLARKWRPQDFQQMVGQAHVLRALMNALDENRLHHAYLFTGTRGVGKTTLARIFAK
CLNCETGVTAKPCGECRSCREIAEGRHVDLIEVDAASRTKVEDTRELLDNVQYSPTRGRF
KIYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLKRMPV
EMISGHLSTVLEQEAIPFSEAALRLLARAADGSMRDALSLTDQAIVTGGGAVSEADVQDM
LGLLPHEHLIGLLQAIADDDGQRMLGIVAQMAQLTTDFTAAADSLIALLHSIAVQQVVTR
DDADEDIAALAKLLSPADVQLYYQMALYGRRDLPLAPDPRGGLEMLLLRMLAFRLDDGQS
QPHSTQVEKKKIVVEAGNPPHPNPPLQGGREHKVPTSFSLPPSPLAGEGLGMGGSNTWHT
ILPQLNLSGMALPLAQHCLLESITDTHITLLLDESGSTLQSPRAAAQLSEALAQHYGREL
QLQFTVTVLTEETPEKRGLREAAERQAAAEAAITNDPFVKQLQETFGAVIVPGSIRPRTN
SG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttcttgcacgaaaatggcggcctcaagacttccagcaaatggttggt
caggcgcatgtgttacgtgccttgatgaacgctctggatgaaaatcgcctccaccacgct
tacttatttaccggcacacgcggcgttggcaaaaccactctcgcgcgaatttttgccaaa
tgcctcaattgcgaaactggcgttaccgcgaaaccgtgtggcgaatgccgcagttgccgt
gaaatcgccgaaggtcgtcacgttgacttgattgaagtcgatgcggcatcacgcactaaa
gtcgaagacacccgcgaattgctcgataatgtgcaatattcccccacacgcggacgcttc
aagatttacctgatcgacgaagtacacatgctttccgggcacagtttcaacgcgctgttg
aaaacactggaagagccgccgccgcacgttaaattcctgtttgcgaccaccgacccgcaa
aaattacccgtcaccattttatcgcgttgcctccaattcaacctcaagcgaatgccggtg
gaaatgatcagcgggcatttaagcacggtgctggaacaagaagccattcccttcagcgag
gcagcattgcggctgttggcgcgtgccgctgatggcagtatgcgcgatgcgttgagcttg
accgatcaggccattgtgactggcggtggcgcggttagtgaagctgacgtgcaagacatg
ctcggcttgttaccgcacgaacacctgattggtttgttacaagccattgctgatgatgac
gggcagcggatgttgggtatcgtcgcgcaaatggcgcagctcactaccgattttaccgct
gcggctgatagcttgattgcgttattacacagcattgcggtgcagcaagtggtaacacgc
gacgatgccgacgaggatattgcggcattggcaaaactgctgtcaccggcagatgtgcag
ctttattaccaaatggcattgtatgggcgacgtgatttaccgttagcccctgatccgcgt
ggcgggttggaaatgctgttgctgcggatgctggcgttccggctggatgatggtcaatct
caaccacactcaacacaggttgagaaaaaaaaaattgtagttgaagcggggaatcccccc
caccctaaccctcccctgcaaggggggagggaacacaaagtgcctacctctttctctttg
cccccttccccccttgcgggggaagggttggggatgggggggagtaacacctggcacacc
atcctcccccagctcaacctctccggcatggccttgccattggcgcaacattgtttgctg
gaaagcattaccgacacgcatatcaccttgttgctggatgaaagtggctcgaccttgcaa
agccctcgcgctgctgcgcaattaagcgaagcgttagcgcaacattacgggcgtgagctg
caattacaattcacggtaacggtgttaactgaggaaaccccggaaaaacgcgggctgcgt
gaggctgccgaacgccaagcagccgctgaagccgccattaccaatgacccgtttgtaaag
caattacaggaaacgtttggcgcggtaattgtaccgggtagcatccgtccgcgcacaaac
agcggttag
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