Candidatus Thiothrix anitrata: J8380_02085
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Entry
J8380_02085 CDS
T07878
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J8380_02085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tani02022
]
J8380_02085
02035 Bacterial motility proteins [BR:
tani02035
]
J8380_02085
Two-component system [BR:
tani02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
J8380_02085
Bacterial motility proteins [BR:
tani02035
]
Pilus system
Twitching motility proteins
J8380_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_23
HTH_28
Mg_chelatase
AAA_16
FleQ
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QTR50396
LinkDB
All DBs
Position
419280..420692
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AA seq
470 aa
AA seq
DB search
MTEQTVLIIDDEPDIRELLEITLLRMGLDTVTAGNVQDALEKIEQYQPNLCLTDMKLPDG
NGIDIVRHLQKNYPHIPVAVITAFGSMDTAVEALKAGAYDFVSKPVDLPKLRELIQTALK
ISGSKHTKHTAKSAEDDAHSSSILGNSAAMQQLKATISKLARSQAPVYIHGESGSGKELV
AQQIHLQGSRATAPFIPVNCGAIPENLMESEFFGHKKGSFTGAVSDKQGLFQAAHRGTLF
LDEVADLPLTMQVKLLRAIQEGAVKPVGGLEETPVDVRILSATHKSLEHEVAAGHFRQDL
YYRLNVIKLKVPPLRERADDISLLADFFLDKIAKRWQMPPIRLSAAARAELQTYPFPGNV
RELENVLERASTLCDNNTIQPDDLQLSTTTQTASALSTPQWVRDSPETDKTPTVSDKLPA
WNPINEEEERNLIVRALDQTRWNRTKAAELLGMSFRQLRYRIQKYGLDEG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaaaccgtactcattatcgacgacgaaccggacatccgcgagctgctggaa
atcaccctattacgtatgggactggacacagtaacggcgggcaatgtgcaagatgcactg
gaaaaaatcgaacaataccagccaaacctttgccttactgacatgaaattacccgatggt
aacggcatcgacattgtgcgccacctccaaaaaaattacccacacattccggttgccgtg
attactgcatttggtagtatggacacagcagtggaagcactcaaggccggggcttacgac
ttcgtatccaagccggtggatttgcccaagctgcgcgaactcatccaaaccgcactcaaa
atttccggcagcaaacacaccaaacacaccgccaaatccgctgaggatgacgcacacagc
agcagtattttgggcaattccgccgcgatgcagcaactcaaagctaccatcagcaaactg
gctcgcagccaagccccagtgtacattcatggcgaatccggcagcggtaaagaattggtg
gcgcaacaaattcacctgcaaggttcacgcgccaccgcgcccttcattccggtgaactgt
ggggcgattcctgaaaacttgatggaaagtgaattctttgggcataaaaagggcagtttt
accggcgcggtcagcgacaaacaagggttgtttcaagccgcccaccgaggcacattattt
ctggatgaagtcgccgatttaccgctaaccatgcaggtcaagttattacgggcgattcaa
gaaggtgcggtcaagcccgtcggtggtttggaagaaacccccgtcgatgtgcgcatttta
agtgccacccacaaaagccttgaacacgaagtcgcggcagggcatttccgccaggatttg
tattaccgcctcaacgtgattaagttgaaagtaccaccgttacgggagcgtgccgacgac
atttccttacttgcggactttttcctcgataaaatcgctaaacgctggcaaatgccacca
attcggttatcggcggcggcacgtgcggaattacagacgtaccccttccccggcaatgtg
cgtgaactcgaaaacgtactggaacgcgccagtaccttgtgtgacaacaacaccattcaa
ccggacgatttacagctatccaccaccacacaaacagcttcggcattgagtacgccgcaa
tgggtgcgagattccccggaaaccgacaaaacccccacggtaagtgacaaactgccagct
tggaatccaattaatgaggaagaagagcgcaacctgattgttcgtgctctggatcaaacc
cgctggaatcgtaccaaagccgccgaattactcggcatgagcttccgccaattgcgttac
cgcatccagaaatacgggttggatgaaggttaa
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