Candidatus Thiothrix anitrata: J8380_02305
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Entry
J8380_02305 CDS
T07878
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tani03009
]
J8380_02305
Ribosome biogenesis [BR:
tani03009
]
Prokaryotic type
ribosomal protein modification factors
J8380_02305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
QTR50436
LinkDB
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Position
464234..465952
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AA seq
572 aa
AA seq
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MQQQTFIPGKDAALEASIETLQAKLLAAGFHIEEASWLNPIANVWSVHIHDRDCPMLFTN
GKGASRKAALASALGEYFERLSTNYFWADFYLGETIANAPFVHYPQERWFALEDADTWPD
GLLDDATRAFYDPESTLAASKLVDINSGNAQRGICALPLVRQRDAATVWFPVNVIGNLYV
SNGMSAGNTPTEARTQALSEIFERYVKFRIIAEGTCLPDVPDAVIARYPGIVAGITELRA
AGFGILVKDASLGGKYPVMCVTLLNPEDQGCYASFGAHPRFEVALERALTELLQGRALDR
LAGFSAPSFDLEDVASPQNLETHFIDSSGPIHWDFLRNTPDHEFVDWDFSGTTAAECQYL
IDIAHAEDFDIYVMDYTHLGVYACRILVPGMSEIYQVDDLEWDNNSAGNEFREAILNLPE
LSEEECADLLDAIEDVGLDEHQPVAALLGLAPDAGSLWADLRVGELKTLLALASGNEDAI
LEGCQWVRHFEQINDDRRRVYRCIEDLLAMQNPTPYLTNLTLMYGETSVQQARDLLSGAT
RFWGITAPTLELYGFETHQRLLTAYRKVHQGL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacaaacctttattcccggtaaagatgccgccctcgaagcctccatcgaaacc
ctgcaagccaaattactcgcagcaggtttccacattgaagaagcctcatggttaaacccc
attgcgaacgtatggtcggtacacattcacgaccgcgattgcccgatgttgtttaccaat
ggcaaaggcgcctcccgtaaagcggcgttggcgagtgccttgggtgagtattttgagcgg
ctcagtaccaattatttttgggcggacttttaccttggtgaaaccatcgccaacgcgccg
tttgtccactacccacaagaacgctggtttgctttggaagacgcggacacttggccggac
ggtttgttagatgatgccacccgcgcattttatgacccggaatccaccttggcggcgagt
aaattggtggatattaattccggcaatgcgcaacgcggtatttgcgccctacccttggtt
cgccagcgcgatgctgccaccgtgtggtttccggtcaatgtgattggcaatttatacgtc
agcaacggcatgtcagcaggcaacacccccaccgaagcgcgtactcaagcgttatcggaa
attttcgagcgttacgtcaaattccgcattattgctgaaggcacgtgcttgcccgatgta
ccagacgcagtgattgcgcgttaccccggcattgtcgcgggcattacggaattacgcgcc
gctggtttcggcattttggtgaaagatgcatcactcggcgggaaatacccggtgatgtgc
gtgaccttactcaaccccgaagatcagggctgctacgccagtttcggggcgcacccacgt
tttgaagtggcattggaacgcgctttaacggagctgttgcaaggccgtgcgctggatcgc
cttgcgggtttttccgcacccagttttgatctggaggatgtcgcttccccgcaaaatctg
gaaacgcatttcattgattccagcggcccgattcactgggatttcttgcgcaataccccg
gatcatgagtttgtggactgggattttagcggcacgaccgccgccgaatgccagtattta
atcgacattgcacacgcggaagatttcgacatttacgttatggattacacccatttgggc
gtgtatgcgtgccgtattctcgtaccgggcatgtcggaaatttaccaagtggatgatctg
gaatgggataacaacagtgccggaaatgagttccgtgaggccattttaaacctgccggaa
ttatcggaagaagaatgcgctgatctgttggatgccattgaagacgtgggtttggatgaa
caccaacccgtcgccgcgctgttagggcttgcaccggatgcgggcagtttgtgggcagat
ttgcgcgtcggcgaactcaaaaccttgttggcattagccagcggcaatgaagacgcaatt
ttggaaggttgccaatgggtgcgccattttgagcaaatcaatgacgaccgccgccgcgtt
taccgctgcattgaagacctgttagccatgcaaaatcccacaccttaccttacgaattta
accctgatgtacggcgaaactagcgtgcaacaagcccgtgacttgctgtcgggcgcgacc
cgtttttggggaattaccgccccgacgctggagctgtacggctttgaaacacaccagcga
ttgctgacagcgtatcgcaaagtgcatcaaggcttgtaa
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