Candidatus Thiothrix anitrata: J8380_04540
Help
Entry
J8380_04540 CDS
T07878
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tani03016
]
J8380_04540 (rnd)
Enzymes [BR:
tani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J8380_04540 (rnd)
Transfer RNA biogenesis [BR:
tani03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J8380_04540 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QTR50840
LinkDB
All DBs
Position
899487..900629
Genome browser
AA seq
380 aa
AA seq
DB search
MFEYINTPQQLNDLMTRLDNAEWVTLDTEFIREKTYFPRLCLIQIGSTDTLACIDPLAIT
DLRPFLTWLQDPKRLKVLHAAWQDMEIFHHLGQGELPSPLFDTQIAAAVLGMGDQMGYAR
LVEGVLGITLDKSQSRTDWSRRPLSKAQLEYAIDDVRHLRDVYLALREQLQQLGRMKWLD
KPFQKLADANTYNIDPQTCWERIRGLQVLKPHQLAVLRELAAWREQRALQKDLPRRWLLS
DEILLDMARMQPNSAEGLRHIRGLSDEQIDRGAAEWLGCIARGKAVPKSEWPNLPRRRKL
DENMSVVADLLTAVLNQIANENGISAQMIATRQQLEKMLEEGRTTLSDDWRGALVNDAFT
ALLSGKAQVSVQQQRVVIAA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatacatcaatactccacaacaacttaatgatttgatgacccgtttggataac
gctgaatgggtgacgctggataccgagtttattcgtgaaaaaacctattttccgcgcctt
tgcctgattcagattggcagtaccgatacgctggcgtgcattgatccgttagcaattacg
gatttgcgtccgtttttgacttggctacaagaccctaaacgcctgaaagtgttacacgcc
gcttggcaggatatggaaatcttccaccatttggggcaaggggaattgcccagcccgttg
tttgatacccaaattgcagcagcggtgttgggcatgggtgatcaaatgggttacgcccgt
ttggtggaaggcgttctgggcattaccttggataaatcgcaatcacgcaccgattggtca
cgccgccccttgagcaaagcccaactggaatacgcgattgatgacgtgcgccatttacgt
gatgtctaccttgccttgcgtgaacaactgcaacaattagggcggatgaagtggctggat
aaaccgtttcagaagttggcggatgccaatacttacaacattgatccgcaaacgtgttgg
gagcgcatccggggcttgcaggtgttgaaaccgcatcaactcgcggtattgcgtgaatta
gccgcatggcgtgaacaacgggcgttgcagaaagatttaccacgtcgctggttattatcg
gacgaaattctgctggatatggcacggatgcaaccgaatagcgcggaaggtttgcgccat
attcgtggcttaagtgatgagcaaatcgatcgtggtgcggcggaatggctaggctgtatt
gcgcggggtaaagcggtgccgaagagcgagtggccgaatctgccgcgtcgccgtaagctc
gatgaaaacatgagtgtggttgcggatttgctgacggcggtcttgaatcagattgccaat
gaaaacggcatttccgcacaaatgattgccacccgtcagcaactggaaaaaatgctggaa
gaaggccgcaccaccctatctgatgattggcgcggcgcgttggtcaatgatgcgtttacc
gcgctgctgtccggtaaagcgcaagtcagcgtgcagcaacagcgcgtagtgattgccgct
taa
DBGET
integrated database retrieval system
