Candidatus Thiothrix anitrata: J8380_04585
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Entry
J8380_04585 CDS
T07878
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_04585
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8380_04585
Archaeal homologous recombinant proteins
J8380_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
BLOC1_2
AAA_21
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-ProteinID:
QTR50849
UniProt:
A0ABX7X806
LinkDB
All DBs
Position
complement(911605..915276)
Genome browser
AA seq
1223 aa
AA seq
DB search
MRILQIRFKNLNSLAGEWIIDLTQPAFTSDGIFAITGPTGAGKSTILDAICLALYGCTPR
LGKITKGGNEIMSRHTGECHAEVTFETQTGLFRSHWSQHRARKKAGGELQNPKHEIVDAQ
ANKPIATALREVADQIERITGLDFERFTRSILLAQGSFAVFLNADPDKRAPILEQITGTG
IYSQISIKVHERRSTERKKLETLQAGLKGLRALNAVEEQQYRLELQQKHLVTQQLEQQIN
QHEQFIAWLENIAVLEQEFALLGTRRETLRDRHEAFQPEQLRLDNAHKALELAGNYTRLS
TMREQQTADQQKYTHLLESIPQQESAYRLAEQVLAAATGNLQTTKQQQNTLRPIFTQVRA
LDARIKDRASTIQQAEQLLKAQQDKLDTLKTQQLTAQGELADKEKAAAETRQFLAEHRTD
QNLVEHFAGIQQQFILLRGLNQQLSGKLAEQASATILQQQTLAARTAKTAALETHAQQIG
NTRHTLAQQEEEFRQLLQDKDTGVWRQTLADLKDKKGLLERLSRSIQSVGETRHKQATLH
TEREQHQLKCTALNHQSELQQAKHTALEDKVQRLEERQTLLKTIQSLTEHRHQLKDGEAC
PLCGSPDHPYATGNIPPLDETANALKSAKTDLKAFAKQLIDLNAQQVTVQKDLENNAAQQ
RECTQKMATEIPLIQQEFSALAIETTEDDWKPLLQTLQQENATRLAETTMLVQTAEQHEK
AIGALKVSLQHQQETLHQLDREMQQAVHASDSAAETCQRIQQEAVELDTHLKAELAVVSS
TIIPYGIPAFSVDELEQVEHKLSYRRQQWIERNEYHNQLEKSLTTLQQQLQHLGEQHRQQ
QTEVTRQQDALQTLKQVQAEGLEERLSLFGNKQADEEESRLLKAVEEAESQLEVQRQTSN
AANRELHRLQTEKHALETTMDGRSKLLQTQEDAFLTLLLKIGFSDEVDYLAACLPETERQ
QLAQQAQKLATEWAELETKAKDKTVQLANERGKQLTGQSPEQLMQARDVFKAELSGIQQN
IGGIQHKLAENERLKHEQDAQLRTIAVQQRECNRWDNLHELIGSADGKKYRNFAQGLTFD
VMITHANQQLQKMSDRYLLTRNRQQPLELNVIDTYQAGEVRSTRNLSGGESFIVSLALAL
GLSHMASQNVRVDSLFLDEGFGTLDEDALDTALETLAGLQQDGKLIGVISHVQAMKERIN
TQIQIRLQTGGRSIITGPGCRKA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctgcaaatacgcttcaaaaacctgaattcactggcaggtgaatggatcatc
gaccttacccaacctgctttcacatccgacgggatttttgctattactggcccgacaggg
gctggcaaaagcaccattcttgacgctatttgcctggcactttatgggtgtaccccgcga
ctagggaaaattaccaaaggcggcaacgagatcatgtcccggcatacgggcgaatgtcat
gccgaagtcacctttgaaacccagactggcctgttccgtagtcactggagccagcatcgt
gccagaaagaaggcaggaggcgagctacaaaaccccaaacacgaaattgtcgatgcacaa
gctaacaagcccatagccacggcattgcgtgaagttgctgaccaaattgagcgcattacc
gggttggatttcgagcgttttacccgctccatcctgttggcacagggaagttttgccgta
tttctgaatgcagacccagataaacgtgcgccgattctggaacaaattaccggaactggc
atttacagccagatttccatcaaagtgcatgaacgccgtagtaccgaacgtaaaaagctg
gaaaccctgcaagcggggctaaagggtttacgtgcactgaatgcggtggaagaacagcag
taccggctagaactacaacaaaaacaccttgtcacccaacaactggaacaacaaattaac
cagcatgaacagttcatcgcatggctggaaaacatagccgtgcttgagcaggaattcgct
ctgctgggtacgcgccgggaaacgctgcgagaccgtcatgaagctttccagccagaacaa
ttacgactggacaatgcccacaaggcattggaactggcagggaattacactcgcctatcc
accatgcgcgaacaacaaaccgccgaccagcaaaaatacacccacttgctggagtccatt
ccccagcaggaaagtgcttaccgactggcagaacaggtgctggctgcggctactggtaac
ttgcaaacaaccaaacagcaacaaaataccttacggcctattttcactcaggtcagggcg
cttgatgccagaatcaaagaccgggcaagtacaattcagcaggcagaacagctactcaag
gcgcaacaggacaagttggatacgctcaaaacccagcagctaacggcacaaggtgagttg
gcggataaagaaaaggctgcggctgaaacccgtcaatttctggctgagcatcgtactgat
caaaaccttgtggaacattttgctggtatccagcaacaattcatcttgctgcgcggtctg
aatcaacaattgtctggcaagcttgccgaacaagcatccgctaccatcctccaacagcaa
acactggcggcacgcacggcaaaaacggctgcattggaaacacacgcccaacagattgga
aacacccgccatacccttgcccaacaagaggaggaattcagacaattgctgcaagacaag
gatacgggtgtatggcggcaaaccttggcggatctaaaagacaaaaaagggctactggaa
agactgtcccgttccatccagtctgttggggaaacaagacacaaacaggccacactccac
accgaacgggaacagcatcaacttaaatgcactgccctgaatcaccagagtgaactacaa
caagccaaacacactgcactggaagacaaagtacaacggctggaggaacgtcaaacacta
ttaaaaaccatccagtccctcacagaacaccgccaccagttgaaggatggggaagcttgc
ccgctgtgtggctcccccgatcatccttatgccaccggcaatattcccccgctggatgaa
actgccaacgcgcttaaatcagccaaaaccgatctcaaagcattcgccaaacagcttatc
gacctgaatgcacaacaagtaactgtccagaaagacctagaaaacaatgcagctcaacaa
cgcgaatgcacccaaaaaatggcaacggaaattcctctcatccagcaagaattttcagca
ctggcgatagagactactgaagatgactggaaaccactgctgcaaaccctgcaacaggaa
aatgctacccgtctggcggaaacgaccatgcttgtgcaaacagccgaacaacacgaaaag
gctatcggcgcactgaaggtatcccttcagcaccagcaggagacgttacaccaattggat
cgggagatgcagcaggcggttcatgccagtgattcagcggctgaaacatgccagcgcatc
cagcaagaggcggtggagcttgatactcatctcaaagcagagctggcagtagtatccagc
accatcattccctatggcataccagcgttctctgtcgatgagcttgagcaagttgagcac
aaactctcttaccgtcgccagcaatggattgagcggaacgagtaccataaccagcttgaa
aaatcactgacaacactgcaacaacagctacaacatctgggtgaacagcaccgccagcaa
caaacggaagtgacccgacagcaggatgcactccaaacgttaaagcaagttcaggcagag
ggtcttgaagagcggctatccttgttcgggaacaagcaagcggatgaggaagaatcccgc
ttgctcaaagctgttgaagaggcggagtcacaacttgaagtgcagcgtcagacatccaat
gctgccaatcgtgaactgcataggctacagacggaaaaacacgcccttgagaccaccatg
gatggcaggagcaagctattacaaacacaggaagacgcctttctgacactgctgcttaaa
atcggctttagcgatgaggtggactatcttgccgcctgcctccccgaaaccgaacgccag
caactggctcaacaagcacagaaacttgccactgaatgggcagaactggaaaccaaggcc
aaggacaaaacggtgcaattggcaaacgaacggggcaaacagctaaccgggcaatcccct
gagcagctaatgcaggcgcgtgatgtattcaaggccgagctgagcggcatccagcagaat
attggtggcattcagcacaagctggcggaaaatgaacgcctgaaacacgagcaggacgca
caactcagaactattgcggtgcaacaacgcgaatgcaaccgctgggataatctgcatgag
ctgattggctccgcagacggaaaaaagtaccgcaattttgcccaaggtctgacgtttgac
gtgatgatcacccatgccaaccaacagctacagaaaatgagtgatcgttacttgctgaca
cgcaaccgtcagcagccgctggaactgaatgtgattgatacctatcaggcaggtgaagtc
cgctccacccgcaacctctccggtggcgaaagcttcatcgtcagcttggcactagcacta
ggcttgtcgcatatggcaagccaaaacgtcagggtagactcactgtttctggacgaaggt
tttggcacgctggatgaagatgcgctggatacagcactagaaaccctagccggtttacaa
caagacggcaagctgatcggggtgatttcgcatgtccaagccatgaaagagcgaattaat
acccagatacagatcagattacagaccggaggacgcagtattatcaccgggccagggtgt
agaaaagcgtga
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integrated database retrieval system