Candidatus Thiothrix anitrata: J8380_04590
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Entry
J8380_04590 CDS
T07878
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_04590
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8380_04590
Archaeal homologous recombinant proteins
J8380_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QTR50850
LinkDB
All DBs
Position
complement(915280..916527)
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AA seq
415 aa
AA seq
DB search
MKILHTSDWHLGRTLYGKKRYEEFAAFLHWLTDTINQHQVDVLLVAGDVFDTGTPSNRAQ
ELYYRFLRNVGKSSCRHVVITAGNHDSPSFLNAPKDLLRTLNIHVIGATSGSPEEEVLLL
SSQTGTPELVVCAVPYLRDRDIRLAEAGESIADKESKLLDGIRSHYALVGELAEQQRNAN
HPDLPIVATGHLFTAGGQTIDGDGVRELYIGSLAHVGASVFPACIDYLALGHLHVPQKVG
GSETRRYSGSPLPMGFGESRQRKTVCLVEFRGRAASVLPLDVPIFQALEQIRGNLIAIET
RLAELVAAHSQAWLEIIYTGEEVISNLREHLESLLAGTSMEILRIKNNRVTDCGLQPTNE
GESLDDLDVTDVFKRCLSVHAVPEAQWPDLLHTYQEVLHSLHEDVPVEPSGKGQG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattcttcacacttctgattggcacttgggtcgtactctctatggcaaaaaacgt
tatgaggaattcgcggctttcctacactggctaacagacaccatcaaccagcatcaagtt
gatgtgttgctggtagcaggggatgtgttcgataccggcacacccagcaaccgcgcccaa
gaactgtactaccgtttcctgcgcaatgtgggcaagtcatcttgtcgccacgtcgtgatc
actgctgggaaccacgattccccttccttcctcaatgctcccaaagatttgttgcgtacc
ttgaatattcacgtcatcggagcaaccagcggctcgcccgaagaagaagttttgctgctg
agtagtcaaactggcacaccagaactggtagtttgcgccgtgccttatttacgggatcgt
gacatccggctagcagaagctggggaaagtatcgcagacaaggagtctaaactgctggat
ggtatccgctcccattatgcgctagtgggtgaattggcagaacagcagcgcaatgccaac
catcctgatctacctattgttgctaccggacacctgtttacggcaggcggtcaaaccatt
gacggcgatggggtgcgcgaactctacattggctcgcttgcccatgttggtgcaagtgtt
tttcccgcctgcattgactaccttgcgcttgggcatctgcacgttccgcaaaaggtgggt
ggttcagaaactaggcgttacagcggttcgcccttaccgatgggttttggcgaatcccgc
cagcgcaaaactgtctgtctggtggaattcaggggtagagcggcaagcgttttgccattg
gatgttcccattttccaagcattagaacagattcgcggcaacctgatagccatcgaaacc
cgacttgcggaactggttgcagcacatagtcaagcatggttggaaatcatctataccgga
gaagaagtgatcagtaacctgcgtgaacacttggaatccctactggcgggaaccagcatg
gaaattctgcgcatcaagaacaatcgggtcacggattgtgggttgcaaccaactaatgag
ggtgaatcactggatgatctggatgtaacggatgtgtttaaacgttgcttgagtgtccat
gctgtaccagaagcacaatggccggatctgttacacacctaccaagaagtgctgcactca
cttcatgaagacgtgccagtagaaccatcaggcaaaggacagggataa
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