Candidatus Thiothrix anitrata: J8380_04805
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Entry
J8380_04805 CDS
T07878
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_04805
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8380_04805
Archaeal homologous recombinant proteins
J8380_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_15
AAA_29
DoxX_2
AAA_21
SbcC_Walker_B
DUF6297
DUF2207_C
Fumarate_red_C
DUF4345
TMEM128
Motif
Other DBs
NCBI-ProteinID:
QTR50893
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Position
952706..954574
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AA seq
622 aa
AA seq
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MIITALKASDFRKYADLHLTQLPERGLIAVIGCNESGKSSIGDAIQFGLFGCTAQLDETQ
VSKLIRWGTEQTTVTLHLQHRGHAYHLIRSVNQAGDTMATLFSTEEGLTLADTPETVEHQ
LKALLGYNHKAFSQAFYWSQQTAQLPQGDNEQLLALAGLKEYANLSGQLQNENRERIQTI
AQMNDARKQLQANLNGLQIDEARLPQLENIGGVLEQRQQSFLQLGQRIDKEVATYPDNRE
QFVALQQQSEKLGFWTRTTLMLFALMLLTGLFLLLSPEQWVSGMSENLRETLGKATIRIA
AVIALVGAVLLIYGWFVDARRLRPLRLQANRLADTLLEGFDVTNTPADQQLDQDQNPEVH
DAARYLLETQTDIPAVSSDHPDIAVLPEWAESVRRYELSMNNLQGAADALNISMETRNRE
FGRYLQVLNSDKAEQVAALNQREQYQAQLDQQEMALEHIRRDRVVFDTALDLLQRSGSQS
VVRFNQLVQQRCRELLQRFTNGHYHTLELMPDFSLKVLSEQKGAYLDFIETSAGTQRQIA
LAMRVAVAAALADNTHTTHQVLFLDEPLAFFDPERSLSTLQSLQSVSQSAVSQVWLTAQT
VPEGVDFARVIHCPQVGSELHA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattattacggcacttaaagccagcgattttcgcaaatacgctgacctgcacttaacc
caactgcctgaacgcggtctgattgcggtgattggttgcaatgaatccggcaaaagcagt
atcggtgatgcgattcagttcggtttgtttggttgcaccgcgcaactggatgaaacccaa
gtgagtaagttgattcgttggggtactgaacaaaccactgtgaccttgcatttacagcac
cggggtcatgcttatcatctgattcgttcggtgaaccaagccggtgacacgatggcaacg
ctgttttcgaccgaagaggggctaactctcgcggatactcctgaaacggtggaacatcag
ctcaaagctttgttgggctataaccataaggcattttcccaagcgttttactggagtcag
caaaccgcccaactgccacaaggcgataatgagcaattgttggcattagccggtttgaag
gagtacgcgaatctcagcgggcaattgcaaaacgaaaatcgtgagcgtattcaaaccatt
gcgcaaatgaatgatgcccgcaaacagcttcaggcgaatttaaacgggttacaaattgac
gaagcgcggttaccgcaactggaaaatattggtggggtactggagcagcggcagcagtca
tttctgcaattgggacagcgtattgataaggaagtggcaacttatcctgataatcgtgag
caatttgtagcgttgcaacagcaaagcgagaagcttggtttttggacacgtaccacgttg
atgttgtttgccctgatgttgttaacggggctgtttttattgctttccccggagcaatgg
gtatcggggatgagcgagaatttgcgtgaaacactcggtaaggcgacgattcgcattgcc
gctgtcatcgctttagtgggggctgttttattaatttatggctggtttgttgatgcacgc
cgcttacgtccgctacggttacaggcgaatcggctggcggataccttgctggaaggcttt
gatgtcactaataccccggctgatcagcaattggatcaggatcagaatccagaagtgcat
gatgctgcgcgttatttgctggaaactcaaaccgatattccggccgttagcagtgatcac
cctgatattgccgtattgccggaatgggcggaatcggtgcggcgttatgagttgagcatg
aataatttgcagggtgctgcggatgctctcaatatcagcatggaaacccgcaatcgcgaa
ttcgggcgttatttacaggtattaaacagcgacaaagcagagcaggttgcggcacttaac
cagcgtgaacagtatcaagcacaactggatcaacaggaaatggctcttgaacatatccgg
cgcgatcgtgtggtgtttgatactgcactggatttattgcaacgtagcggtagccaatcg
gtggtgcgttttaaccaactagtgcagcagcgttgtagggagttgttgcaacgttttacc
aatggtcattaccacacccttgaattaatgcctgatttcagcctgaaagtgttatcggag
cagaaaggggcttatctggattttatcgaaacatctgctggaacccagcggcaaattgct
ttggcgatgcgggtggcggtagcggcggccttagcagataacacccacactactcatcaa
gtgctatttttggatgagccgttggcattttttgacccggaacgtagtctgagtacctta
caaagtttacagtcagtcagccagtcggcggtgagccaagtatggttaaccgcacaaacg
gtgccggagggtgttgattttgcaagggtgattcattgtccgcaggttggttcagaattg
cacgcttag
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