KEGG   Candidatus Thiothrix anitrata: J8380_05285
Entry
J8380_05285       CDS       T07878                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
tani  Candidatus Thiothrix anitrata
Pathway
tani02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tani00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    J8380_05285
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tani02022]
    J8380_05285
Two-component system [BR:tani02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   J8380_05285
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_3 FleQ HTH_50 AAA_7 AAA AAA_16 AAA_22 Herpes_BLRF2 AAA_2 DUF815 ResIII
Other DBs
NCBI-ProteinID: QTR50979
LinkDB
Position
complement(1041353..1042714)
AA seq 453 aa
MIPSTILLIDDEKAVRDATAQSLLLAGCEVETFSNAPAALLKVTPEFEGVIISDIRMPDM
DGLEFLERVLKIDRDLPVILISGHADVATAVAAIRQGAYDLLEKPFSNTQLLDVIKRATE
KRRLTLENRALKEALENQTRPGPRIIGQTPAIIQLRKMITRLANVNADVLIWGETGTGKE
LVARSLHEQSKRRDHNYVAINCAAIPASLLDSELFGHEAGAFTGAKGKRIGKFEHANGGT
LFLDEIEGMPLSTQAPLLRVLQERKIERLGSNHLIPLDIRVVAATKVDLKDAAERAEFRK
DLYYRLNVVTLEVPPLRARREDIPLLFQHFVLVAAARCETEVPPLNSKALHVLLGHDWPG
NIRELRNIAERYVLLGETFHFDLAVLMNSDEKFDGLSLAQQVACFEKTLIEQALNRHKGN
TREVMDALDLPRKTLTDKMKKYGLERGQFQEPG
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgatccccagcacaatcttgttaattgacgatgaaaaagccgtgcgcgatgccaccgcg
caatcgctgttgctggcggggtgcgaagtggaaacctttagcaatgcccctgctgcgttg
ctgaaagtgaccccggaatttgaaggtgtgattatttcagacatccgaatgccggatatg
gacggtttggaatttctggaacgggtattgaaaattgaccgcgatttgccggtgatttta
atcagcggacacgccgacgtagccaccgccgttgccgccattcgccaaggggcttacgac
ttactggaaaaaccgtttagcaatacccagttgttggatgtgattaaacgcgccactgaa
aaacgtcgtctcacccttgaaaaccgtgccctcaaagaagctctcgaaaaccaaacgcgc
cccggcccgcgcattattgggcaaacgcctgcgattatacagctccgcaaaatgattacc
cgccttgccaatgtgaatgccgatgtactgatttggggggaaaccggcacgggtaaggaa
ctggtggcacgttccctgcacgaacaaagcaaacgccgcgatcacaattacgtggcaatc
aattgcgcggcgattcccgccagtttgctcgacagcgaattattcgggcacgaagccggg
gcttttaccggagccaagggcaaacgcatcggcaagtttgaacacgccaatggcggcacg
ctgtttttagatgaaatcgaaggaatgccgctatccacccaagccccgttattacgggta
ttgcaagagcgcaagattgagcgactcggctccaatcacctaattccgctggatattcgc
gtggttgccgccaccaaagtggatttaaaagacgcggctgaacgcgccgaattccgcaaa
gatttgtattaccgcctcaatgtagtgacgctggaagtgccgccgttgcgggcgcgacgt
gaagacattccgttattatttcagcattttgtgctggttgcggcggcgcgttgcgaaacc
gaagtgccaccactcaacagcaaagccctgcacgttttattggggcacgactggccgggt
aatatccgcgaattgcgtaatattgccgagcgttacgtgttattgggcgaaacctttcac
tttgaccttgccgtattaatgaattccgatgagaaatttgatggcctgtcactggcgcaa
caagtcgcgtgctttgaaaaaaccctgatcgaacaagccctcaaccgtcacaaaggcaac
acccgcgaagtcatggacgcactcgatttaccgcgcaaaacccttaccgataaaatgaaa
aaatacggattggagcgcggacagtttcaggagccgggttaa

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