Candidatus Thiothrix anitrata: J8380_05475
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Entry
J8380_05475 CDS
T07878
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03030
DNA replication
tani03430
Mismatch repair
tani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J8380_05475
03430 Mismatch repair
J8380_05475
03440 Homologous recombination
J8380_05475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tani03032
]
J8380_05475
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_05475
Enzymes [BR:
tani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J8380_05475
DNA replication proteins [BR:
tani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J8380_05475
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J8380_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DNA_polI_exo1
DEDDh_C
RNase_H_2
CC_Liprin_beta
Motif
Other DBs
NCBI-ProteinID:
QTR51015
UniProt:
A0ABX7X8B2
LinkDB
All DBs
Position
1080860..1083046
Genome browser
AA seq
728 aa
AA seq
DB search
MRKVDWRIIIGVGIVGVVCLVWLLVTGGLIWAALGEADREAITTAIGPRIALLVVMWAIS
LVAVGLVLRQLIAYFMTAPARLAEEAQVLLGTDVKRRLVAQGSVENRRLTDLFNQLVEQR
EALRSEMDVRVQEASRNTEMEKSRLAALMSELTKSVVVCNLDGRILLYNNRARMQFRALS
KVPGVAGGAELVGLGRSIYSVFDRKLVTHALENIQHRLQRGAASPSAQFVTTTQAGQLLR
VQMAPVRAVQSPDGAADIAVSNDLTGFVLMLDNITREFEADSEKDRVLYSLTEGSRAALA
NAQAAVEVLEYPDIEAEMRERLLHVIREEIQGLGKRIDEMQTSSTNNLRSRWPLEDMLGA
DFIEAAVRRIETSLPVRAEWDAVDTSLWLKVESFSLLQALVHLSSRLNIECGVDTVQLRL
AENAQRAQLDLLWTPQTPDIKAMMNWELEQIRSGSETLSLTVQDVLTRHGGDSWYERDAD
GVRAFFRFLLPLAAPQEELASATFLRNESRPEYYDFDLFQSSEQSRSLEDRLLTELTYTV
FDTETTGLNPAGGDEIIQVGAVRIVNGKLLQQEFFDQLVDPKRTIPAETIPIHGIKPEMV
KGQPTIGQVLPAFHTFAQDTVLVAHNAAFDMRCLQVKEKATGIVFDHPVLDTLLLSAVLH
PNQESHRLEAIAERFNVTVIGRHTALGDSIVTAEVFLKLIPLLAEKGILTLRQAREEAQK
TFYARLKY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggtggattggcggattattatcggagtcggcattgttggggtagtgtgtttg
gtatggttgctggtgactggtgggttgatctgggcagcattgggtgaagctgatcgtgaa
gccatcacgacagctatcgggccgcgcattgcgctattggtggtgatgtgggcaatttcg
ctggtcgcggttgggttggtgttacgccaattgattgcctacttcatgactgcaccggca
cgtttggcggaagaggcgcaagtgttgctgggaacggatgtcaaacgtcgtttagtggcg
caaggcagtgtggaaaaccgccgcctgaccgatctgtttaatcaactggtggagcagcgc
gaagctttgcgttcggaaatggatgtgcgcgtgcaggaagccagccgcaataccgaaatg
gaaaaaagccgcctcgcagcgttaatgtctgaattaaccaaaagcgtggtggtgtgcaat
ttagacggacgcattttgctgtacaacaaccgcgcccgaatgcaattccgcgccttatcc
aaagttcccggtgtcgcgggtggtgcggaactggtgggtttaggacgttcgatttacagt
gtctttgaccgcaaattagtgacacacgcgctggaaaatattcaacatcgcctgcaacgc
ggtgctgccagcccttccgcacaatttgttaccaccacccaggcggggcaattgctgcgg
gtgcaaatggctccggtacgcgcggtgcaatcgccagatggtgctgcggatattgccgtg
agtaacgaccttactggcttcgtgctgatgctcgacaatattacccgcgaatttgaggcc
gactcagaaaaagaccgggtgctgtacagcctgaccgaaggtagccgcgccgcactggcg
aacgcgcaagccgccgtcgaagtgctggaatatcccgatattgaagccgagatgcgtgag
cgtttactacacgtgattcgtgaagaaattcaggggctgggaaaacgcattgatgaaatg
caaacctcttccaccaacaatttgcgctcgcgctggccgctcgaagacatgcttggcgcg
gatttcattgaggctgccgtgcgccgtatcgaaaccagtttaccagtacgtgccgagtgg
gatgcggtggatacttcgttgtggttaaaggtggaaagcttctcgctgttgcaggcattg
gtacacctgagtagccgcttaaatatcgagtgcggggttgatacggtgcaattgcgcctc
gccgaaaacgcgcagcgtgctcaactggatttgctgtggacaccacaaacacccgacatc
aaagccatgatgaactgggagttagagcaaatccgttccggctcagaaaccctatcattg
acggtgcaagacgtgctcacgcgccacggcggagactcttggtacgaacgtgatgctgat
ggagtacgcgcatttttccgctttttgctaccgcttgccgcaccgcaggaagagctagct
tccgctacgtttttgcgcaatgaaagccgcccggaatactacgatttcgacctattccaa
agctccgaacaatcgcgctcgttggaagaccgcttattaactgaactgacttacaccgtg
tttgacaccgaaaccaccgggcttaacccggctggcggcgacgaaatcattcaggtagga
gcggtacgcattgttaacggcaagctgttgcagcaagaattcttcgatcaactggttgac
ccgaagcgcacgattcctgccgaaactatccccatccacggcatcaagccggaaatggtc
aaaggccaacccaccatcgggcaagtgctgcctgccttccacacctttgcgcaagatact
gtgttggtggcacacaatgccgctttcgatatgcgctgcttacaggtcaaggaaaaagcc
acgggaatcgtgtttgatcatccggtgctggatacgttgctgctttccgctgtgctgcac
cccaatcaggaatcccaccgcctggaggcgattgccgaacgctttaacgtcaccgtcatt
ggacggcataccgcgctgggtgactcgattgtaacggcggaagtgttcctgaaactgatt
ccattactcgcagaaaaaggtattctgactctgcggcaagcgcgggaagaagcacagaaa
acgttttatgcgcgattgaagtattaa
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