Candidatus Thiothrix anitrata: J8380_05790
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Entry
J8380_05790 CDS
T07878
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tani03016
]
J8380_05790 (truD)
Enzymes [BR:
tani01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J8380_05790 (truD)
Transfer RNA biogenesis [BR:
tani03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J8380_05790 (truD)
Prokaryotic type
J8380_05790 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QTR51758
LinkDB
All DBs
Position
1145656..1146732
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AA seq
358 aa
AA seq
DB search
MTTFATSGFARAYAAPLCGQFRVLPEDFIVDEQMDIALSGVGEHLWLQIRKTSSNTDWVA
IQLANIAGIAAKDVGYAGQKDRHAVTTQWYSVQLPGKADPDFSALPPEIEILQQCRHDKK
LRRGALSSNRFVLTLRECSGDFAQAQAICEQISQHGIPNYYGEQRFGHEGGNVDKATRWF
QGELRPKTRNQCSMYLSAARSWIFNHILAQRVQDGTWNQRLPGDVFMLDGSNAWFADDAA
ENLPERLSSLDIHPSGVLWGKGELDTQAQARELELTQAARFPALCAGLEKQGLKAERRAL
RIKVSELQCEVLDASTLRLAFALPPGAFATVLLEQLGEFVAAHPATAPRPLLNEPLTA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctttgcgaccagcggttttgcccgcgcttatgccgcgcctttgtgcggtcag
tttcgggtattgccggaagattttatcgttgatgaacagatggacatcgccttgtcgggt
gtcggtgaacatttgtggctgcaaatccgtaaaaccagctctaacaccgactgggtggcg
attcagcttgccaatattgccgggattgcggcgaaagatgtgggttacgcggggcaaaaa
gaccgtcatgcggtgacgacgcaatggtacagcgtgcaattacctggcaaagccgaccca
gatttttccgcattgccgccggaaatcgaaatcctccagcagtgccgccatgataaaaaa
ctgcggcgcggcgcacttagcagcaaccgttttgtactgaccttgcgtgaatgcagcggt
gattttgcgcaagcgcaggcaatttgcgaacaaatttcccagcacggtattcccaattat
tacggcgaacagcgtttcgggcatgaaggcggtaatgttgataaagccactcgctggttt
cagggggaattacgccccaaaacccgtaatcagtgcagtatgtatttatcagcagcgcgg
tcgtggatttttaaccatatcctcgcgcagcgggtgcaggatggcacttggaatcagcgt
ttacccggtgatgtttttatgctggatggcagcaatgcgtggtttgcggatgatgcggct
gaaaacttgccggaacgcttgagtagtttggatattcaccccagcggtgtgctgtggggc
aagggcgaactcgatacccaagcgcaagcgcgtgagctggaattaacccaagcggcgcgg
tttccggcgttgtgtgcgggcttagaaaagcagggcttgaaagcagagcgtcgtgcgttg
cggatcaaagttagtgagttgcagtgtgaggtgttggatgcgtctacgttgcgcttggcg
tttgcattaccaccgggggcgtttgctacggtgttgttggaacagttgggtgaatttgtt
gcagcgcatccagcaaccgcgccacgtccgctgttgaatgagccgctgacagcgtaa
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