Candidatus Thiothrix anitrata: J8380_06710
Help
Entry
J8380_06710 CDS
T07878
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J8380_06710 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_06710 (ruvB)
Enzymes [BR:
tani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J8380_06710 (ruvB)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8380_06710 (ruvB)
RecFOR pathway proteins
J8380_06710 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
AAA_16
Mg_chelatase
TIP49
AAA_14
AAA_3
Rad17
AAA_2
AAA_18
RNA_helicase
NTPase_1
Bac_DnaA
ABC_tran
AAA_17
AAA_28
AAA_24
NB-ARC
AAA_33
Sigma54_activ_2
NPHP3_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
QTR51234
LinkDB
All DBs
Position
1318350..1319408
Genome browser
AA seq
352 aa
AA seq
DB search
MDKQPARTLSPHASREEDRTDDHIRPRRLQDYIGQPVVREQMEIFIGAARQRGDALDHVL
IFGPPGLGKTTLSHIIAHEMGANLRQTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLS
PVVEEILYPALEDFQLDIMIGDGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIVQ
RLEFYNVEDLAYIVRRAGTIVGAQVDEGGAYEIARRSRGTPRIANRLLRRVRDYAQVKHN
GLITSDIADRALNMLNVDEQGFDHMDRRLLLAVMEKFDGGPVGVDSLAAAIGEERGTIED
VLEPFLIQQGYLMRTPRGRVATRRAWQHFGLTIPAHLNAGSNQEGSSFELFE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaacccgcccgcaccctttcccctcatgctagccgcgaagaagaccgcact
gacgatcacattcgcccccgtcggttgcaggattacatcgggcagccagtagtccgtgag
caaatggaaattttcatcggtgcagcacggcagcgcggcgatgcgctggatcatgtgtta
atttttggtccgccggggttgggtaaaaccacactctcccatatcattgcgcatgaaatg
ggcgcaaatttacgtcaaacatcggggccagtattagaaaaagcaggtgatcttgccgcg
ctattaaccaatcttgagccacatgatgtattatttatcgacgaaattcaccgcttgagt
ccggtggtcgaggaaattctttatccggcgttagaagattttcagctcgacattatgatc
ggcgatggccctgcggcgcgttcgattaaactggacttgccaccgtttaccttggtgggg
gcgactacccgtgcggggttgttaacttctccgttgcgtgaccgttttgggattgtgcag
cggctggagttttacaatgtggaggatttggcgtacatcgtgcggcgtgcgggtacaatc
gtgggggcgcaggttgacgagggcggggcgtatgaaattgcgcggcgttcacgcggcaca
ccacggattgctaaccgtttgttacggcgggtgcgagattacgcgcaagtgaagcataac
ggtttgattacgtcagacattgcggatcgtgcgttaaatatgttgaatgtcgatgagcaa
ggttttgaccacatggacagacgcttgttattggcagtcatggaaaaatttgacggtggc
cctgttggggtcgatagcctcgccgctgcgattggggaagagcgcggcacgattgaagat
gtattagagccgtttttaatccaacagggctatttgatgcgtaccccgcgtgggcgtgtc
gcgacacggcgagcatggcaacattttgggctaacgatacccgcacatttgaatgcaggt
agtaatcaagaaggtagcagttttgagctgtttgaatga
DBGET
integrated database retrieval system
