Candidatus Thiothrix anitrata: J8380_06940
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Entry
J8380_06940 CDS
T07878
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03420
Nucleotide excision repair
tani03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J8380_06940 (uvrD)
03430 Mismatch repair
J8380_06940 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_06940 (uvrD)
Enzymes [BR:
tani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J8380_06940 (uvrD)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J8380_06940 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J8380_06940 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
QTR51278
UniProt:
A0ABX7X7N2
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All DBs
Position
1357093..1359357
Genome browser
AA seq
754 aa
AA seq
DB search
MNNTQSPILAPLNPQQQLAVAAPPKSVLVLAGAGSGKTRVLVHRIAWLIEVENVSPLSIL
AVTFTNKAAAEMRGRIQDLLQLPSGGMWVGTFHGISHRLLRLHWQQAKLPQTFQILDSED
QIRMVKRILKSLELDETRFPPRQVASFINARKDEGSRPHHIEDKGDFNQRQMVQIYSVYE
QTCQRNGVVDFAELLLRSLELLRDNPDLQQHYRNRFRHILVDEFQDTNALQYAWLRLLAG
DKNPVFAVGDDDQSIYGWRGAKIENIRNFTKHFPDCETVRLEQNYRSTANILKAANALID
NNKGRLGKNLWTDGKDGERLHLYAAFNEIDEARFVAGRIQKWVDQGGMRRDVAILYRSNA
QSRVFESTFNENRIPYRVYGGLRFFERAEIKDALAYLRLTVNHQDDASFERIVNHPPRGI
GERTVDILRSHARATNLSLWEAAAQAADIGDFTPRASNGVLGFVQLIKRMASDIHSLPLR
EQVEIVIDLAGLKPHFLAKEKGEAGQGRVDNLNELVTAAQGYTYVQVVPDSSLSEVEGND
GFDSAQPTDELSAFLSHAALEAGEGQGEAGEDCVQMMTLHSAKGLEFPLVFLCGLEEGLF
PHQMSADDPARLEEERRLCYVGITRAEKELVMSYAEQRMLHGRTQFNPPSRFLRELPPEL
VEEVRPKVKAYQPTRYTDGGGYRPVTPPAPVRTPNKYAESEVGYRIGQRVRHAKFGDGVI
VDSEGSGAHSRVQVNFKTAGVKWLVLGYANLEKV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacccaatcccccattctcgcccccctaaacccgcagcaacaactcgccgtt
gccgcgccgcccaaatccgtcctcgtcctcgcaggcgcaggcagcggtaaaacccgcgtg
ctagtccaccgcattgcgtggttaatcgaagtcgaaaacgtctcaccattaagcatcctc
gcggtgaccttcaccaacaaagcggcggcagaaatgcgcgggcgtatccaagacctgttg
caactgcccagcggcggcatgtgggtcggcaccttccacggcatttcgcaccgcttgctc
cgcctgcattggcagcaagccaaattgccgcaaaccttccaaatcctcgactccgaagac
cagattcgcatggtcaagcgcatcctcaaatcgttggaactcgacgaaacccgcttcccg
ccgcgtcaggtcgccagtttcattaatgcgcgtaaagacgaaggttcgcgcccgcaccac
attgaagacaaaggcgatttcaaccaacggcaaatggtgcaaatttacagcgtgtatgaa
caaacttgccaacgcaacggcgtggtcgatttcgccgaactgttgttgcgctcgttggaa
ttgctgcgcgataaccccgatttgcaacaacattaccgtaaccgtttccgccacattttg
gtggacgaattccaagacaccaacgcgctgcaatacgcttggttgcgcctgttggcgggt
gataaaaatccggtgtttgcagtgggcgatgacgaccagtcgatttacggttggcgcggc
gcaaagatcgaaaacatccgcaatttcaccaaacatttccccgactgcgaaacggtgcgg
ctggaacaaaactaccgctccaccgcgaatatcctcaaagccgccaatgccttgattgat
aataataaagggcgtttgggcaaaaacttgtggacagatggcaaagacggcgaacgcctg
cacctctacgcagccttcaacgaaatagacgaagcacgttttgtcgcggggcgcattcaa
aaatgggtagatcagggcggaatgcgccgcgacgttgccattttgtaccgttccaacgcg
caatcgcgggtatttgaaagcacgtttaacgaaaaccgcattccctaccgtgtctatggc
ggcctacgcttctttgaacgcgccgaaatcaaggacgcgctggcgtatttgcgcctcacc
gttaaccaccaagacgatgcctcgtttgaacgcatcgtcaatcacccaccacgcggcatt
ggcgaacgcaccgtcgacatcctgcgcagccacgctcgcgccaccaacctgtccttgtgg
gaagccgccgcgcaagccgctgacatcggcgatttcaccccgcgtgccagcaatggcgta
ctcggtttcgtgcaactgatcaaacgcatggcaagcgacattcacagcttgcccttgcgc
gaacaagtcgaaatcgtcatcgaccttgccggactcaaaccgcatttcctcgccaaagaa
aaaggcgaagcggggcaagggcgcgtcgacaacctcaacgaactagtcaccgccgcacaa
ggttacacctacgtgcaggtcgttcccgacagctccctgagcgaagtcgaagggaacgat
ggcttcgactccgctcagccaacggatgaactgtccgccttcctctcgcacgcggcgttg
gaagcgggcgaaggtcagggcgaagccggtgaagattgcgtgcaaatgatgacgttgcac
tctgccaaagggctggaattcccgctggtgtttttgtgcggtttggaagaaggcttgttc
ccgcatcaaatgtccgccgatgacccggcacgcttggaagaagaacgccgcctgtgctac
gtcggcattacccgtgcggaaaaagaactggtgatgagttacgccgaacagcgcatgttg
cacgggcgcacccaattcaacccgccgtcacgtttcctgcgcgaattaccgccggaattg
gtggaagaagtgcgtccgaaagtgaaagcgtaccagcccacccgttacaccgatggcggt
ggctaccgtccggttacgccgcccgcaccagtacgcaccccaaacaaatacgccgaaagc
gaagtcggctatcggatcgggcaacgggtgcgtcatgccaaatttggcgacggagtgatt
gtggattctgaagggtcgggagcgcattcgcgggtgcaggtgaatttcaaaactgccggg
gtgaagtggctggtgttggggtatgcgaatttagagaaggtgtaa
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