Candidatus Thiothrix anitrata: J8380_13130
Help
Entry
J8380_13130 CDS
T07878
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tani
Candidatus Thiothrix anitrata
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tani03032
]
J8380_13130
03036 Chromosome and associated proteins [BR:
tani03036
]
J8380_13130
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_13130
DNA replication proteins [BR:
tani03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J8380_13130
Chromosome and associated proteins [BR:
tani03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J8380_13130
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J8380_13130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QTR49199
LinkDB
All DBs
Position
2610620..2610925
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSEIIDILSRKQSHLSSRDVESSVKLLLDKMSDTLSEGGRIEVRGFGSFSLHHRAARK
GRNPKTGDQVQLPPKHVPHFKPGKELRERVNESREQYPIQE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaaatcattgatattctgtcgcgcaagcaaagccatctcagcagccgt
gatgtggaatcatcggttaagttgttgttggataaaatgagcgacaccttgtccgaaggc
gggcgcattgaagtacgaggcttcggtagtttttcgttacatcatcgtgcggcacgtaaa
gggcgcaaccctaaaacaggtgaccaagtgcagttgcctcctaaacacgttccgcacttc
aaaccaggcaaagagctgcgtgaacgggtgaatgagtcacgtgagcaataccctattcag
gagtga
DBGET
integrated database retrieval system
