Candidatus Thiothrix anitrata: J8380_14470
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Entry
J8380_14470 CDS
T07878
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J8380_14470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_14470
Enzymes [BR:
tani01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J8380_14470
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J8380_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTR51853
LinkDB
All DBs
Position
complement(2889422..2890192)
Genome browser
AA seq
256 aa
AA seq
DB search
MQVMGIPVWMPKDTYGSAEESPLPNLPPQGGKEQELLPSPILLPSPLAGGEAPRLSCWDG
LGMGGASCSHLSWQDLRATVQSCTRCALAKTRTQAVFGAGDVQARWMIIGEAPGADEDRR
GEPFVGRAGQLLNNMLAAIGLPRESVYIANVLKCRPPNNRDPKVDEAANCRGYLERQIEL
VNPTLILVVGRIAAQNLLHTDAPLARLRGKQHRAPVSGTPVVVTYHPAYLLRQPADKRKA
WEDLQFAREILATHVN
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatggggattccggtgtggatgcctaaagatacctacggctccgccgaagaa
tccccccttcctaaccttcccccgcaaggggggaaggaacaagaattgctaccttctcct
attctgctcccttccccccttgcggggggcgaagcgccgcgtttaagctgctgggacggg
ttggggatggggggggcttcttgctcccatctctcatggcaagacctccgcgccaccgtc
caatcctgcactcgctgcgctctagccaaaactcgcacccaagcggtgtttggcgcgggc
gatgtgcaagcgcgttggatgattattggtgaggctcccggtgcggatgaagaccgacgc
ggtgagccttttgtcgggcgggcagggcagttactgaataatatgctggcagctatcggt
ttgccgcgtgaatcggtgtacatcgctaatgtgctgaaatgtcgcccaccgaataaccgc
gatccgaaagtcgacgaagccgcgaattgccggggctatttagaacgccagattgaattg
gtgaatcccaccctgattttggttgtcgggcggattgctgcgcaaaatctgttacacacc
gatgcgccgttagcgcggttacgcggcaagcaacaccgagcacccgtcagcggcacaccc
gttgtggttacttatcaccctgcgtatttactgcgccaacccgccgataagcgcaaggcg
tgggaagatttgcagtttgcccgcgaaatattggctactcatgttaactga
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