Candidatus Thiothrix anitrata: J8380_14575
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Entry
J8380_14575 CDS
T07878
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J8380_14575 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tani03400
]
J8380_14575 (uvrB)
DNA repair and recombination proteins [BR:
tani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J8380_14575 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J8380_14575 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
UB2H
DUF87
PMT2_N
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QTR49453
UniProt:
A0ABX7X3S8
LinkDB
All DBs
Position
2914157..2916181
Genome browser
AA seq
674 aa
AA seq
DB search
MPEADSFYLNTQYQPAGDQPQAIHSLVEGLQDGLVHQTLLGVTGSGKTFTMANIIQQTQR
PAIILAHNKTLAAQLYGEMKEFFPKNSVEYFVSYYDYYQPEAYVPSKDIYIEKDSAVNDH
IEQMRLSATRNLFERKDVIIVATVSAIYGLGDPESYLKMLLILVRGDKIDQRTLLRRLAE
MQYTRNDLDLQRGTFRVRGEVIDIHPAESDKEAIRIELFDDEIENLSYFDPLTGEVLRRV
PRLTVYPKTHYVTPREVLLAAVEHIKVELKDRLNTLRDNDRLVEAQRLEQRTQYDIEMIM
ETGYCSGIENYSRYLSKRPAGSPPPCLFDYLPKNAIVFVDESHVTIPQFGGMYKGDRSRK
ETLVEYGFRLPSALDNRPLRFDEFEQLIPQAIHVSATPGAYELEHSDNVAEQVVRPTGLV
DPQVEIRPVLSQVDDVMSEITLRAQRNERVLVTTLTKRMAEDLTDYLMEHGIKVRYLHSD
IDTVERVEIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNAEGRAILYADKITESMRKAIGETQRRRDKQLAHNELNGITPQTIRKRIADVMEG
AYANATRGKGKTRADKKVAEEAAEYRSLTPDQALKQLKKLEEKMFQHAKNLEFEQAAAVR
DQIAQIRARVFGLA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagcagacagcttttatttgaatacccaataccagcctgcgggtgatcagccg
caagccatacattccttggtggagggtttgcaagatggcttggtgcatcaaaccttgctg
ggggtcacagggtcaggcaagacctttacgatggcgaatatcatccagcaaacccagcgt
ccggcgattattttggcgcacaataaaacgctcgcggcgcagctttacggcgaaatgaag
gagtttttcccgaaaaactcggtggaatatttcgtctcgtattacgattattaccagcct
gaagcttatgtgccgtccaaagatatatacattgaaaaagattcggcggtaaatgaccac
attgaacaaatgcgcttatctgccacccgcaatttattcgagcgcaaagatgtcattatt
gtggctacggtatcggcgatttacggcttgggcgatcccgaatcctatttaaaaatgctg
ctgattttggtgcgcggtgacaaaattgaccaacgcactttgttgcgccgccttgcggaa
atgcaatacacccgcaatgatctggatctgcaacgcggcacatttcgagtacgcggcgaa
gtcatcgacattcacccggcggagtccgataaagaagccattcggattgaattgtttgac
gacgaaatcgaaaacctgagctattttgacccgctgactggcgaagtgttacggcgcgta
ccacgcctgacggtttaccccaaaacccactacgtcaccccgcgtgaagtgttgcttgct
gccgtcgaacacatcaaagtcgaactcaaagaccgcctgaataccttacgcgataacgac
cgtctggtggaggcgcaacgcctcgaacaacgcacccaatacgacatcgaaatgatcatg
gaaacgggttattgttcaggtattgaaaactactcacgctacctgtcaaaacgccctgcg
ggttcgccaccgccgtgtttgtttgactacctgccgaaaaatgccatcgtatttgtggac
gaatcgcacgtcaccattccgcaatttggcgggatgtacaaaggcgaccgctcccgcaag
gaaacgctagtggaatacggttttcggttgccttccgcactggataatcgcccgctgcgc
ttcgatgaatttgagcaattgattccgcaagcgattcacgtttcagcaacaccgggcgcg
tatgaactggagcattccgataacgtcgcagaacaggtggttcgtcctaccgggctggtt
gacccgcaggtagaaattcgcccggtattgtcgcaagtcgatgatgtcatgtcagaaatc
acccttcgcgctcaacgcaatgaacgggtgttagtcaccaccctcaccaaacgcatggcg
gaagatttaaccgattacctgatggaacatggcatcaaggtgcgctatctgcactccgac
attgacacggtggaacgagtagaaatcatccgcgatttgcgtaaaggtgagttcgacgtg
ctggtgggcatcaatttattacgcgaaggcttggacattcccgaagtatccttggtagcc
attttggacgctgacaaggaaggttttttgcgttctgaacgttcgttaatccaaaccatc
gggcgtgcagcacgaaacgctgaaggtcgggcgattttgtatgccgacaaaatcaccgaa
tccatgcgtaaagccatcggtgaaacccaacgtcgccgcgacaaacaactcgcccacaac
gaattaaacggcattaccccgcaaaccatccgcaaacgcattgccgatgtcatggaaggt
gcttacgcgaatgccacacgcggcaaaggcaaaacccgtgccgataaaaaagtcgcggaa
gaagcggcagaataccgcagcttaaccccggatcaggcactgaaacagctcaaaaaactc
gaagagaaaatgttccagcacgccaaaaatctggagtttgaacaagccgcagcggtacgc
gatcaaattgcccagattcgggctcgggtgtttggattagcttaa
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