Candidatus Thiothrix anitrata: J8380_16185
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Entry
J8380_16185 CDS
T07878
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J8380_16185 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tani03019
]
J8380_16185 (pnp)
03016 Transfer RNA biogenesis [BR:
tani03016
]
J8380_16185 (pnp)
Enzymes [BR:
tani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J8380_16185 (pnp)
Messenger RNA biogenesis [BR:
tani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J8380_16185 (pnp)
Transfer RNA biogenesis [BR:
tani03016
]
Prokaryotic type
tRNA degradation factors
J8380_16185 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
QTR49745
UniProt:
A0ABX7X1J5
LinkDB
All DBs
Position
complement(3234277..3236367)
Genome browser
AA seq
696 aa
AA seq
DB search
MAKFTKTFQYGNNTVTIETGEIAKQATAAVMITMDDTTVLVTVVGQKSTVVGRDFFPMTV
DYQEKFYAAGRIPGGFFKREARATEEETLVARLIDRPLRPLFPEGFTNEVQLIATVVSMN
ADVSADIPAMLGSSAVMALSGMPFQGPIGAARVGYRNGEYMLNPSKEDLKTSALDLVIAG
TDSAVLMVESEADELSEEVMLGAVMFGHEQMQVAIQAIKELAAEVGNPAWDWTPPTANTA
LADAVAGACQADLVEAFQVADKQMRYARIDEVLSSTVDKLAAKDGEEGFSADDIKAEFKN
VEKTVVRGSILDGKPRIDGRDLQTVRPISVRLGVLPRAHGSALFTRGETQALVVTTLGTE
RDAQVIDAITGEYKDNFLFNYNFPPYSVGETGRFGSPKRREIGHGRLAKRGVKAMIPHTD
DFPYTIRCVSEITESNGSSSMASVCGSSLSLMDAGVPIKSPVAGIAMGLIKEGERFAVLT
DILGDEDHLGDMDFKVAGSAEGITALQMDIKITGITKEIMQQALVQAQAGRLYILGEMAK
GLEAPRDDISEYAPRYVTMKINPDKIREVIGKGGETIRGITEKTGAQVNIDDEGFIKIAA
VDAKAAYEARTMIEAITAEVEINKVYNGTVARIMDFGAFVTILPGKDGLLHISQISNERV
ENVTDFVNVGDTVQVKVIEIDRQGRMRLSMKDATGE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattcaccaagacattccaatacggtaataataccgtcaccatcgaaactggc
gaaatcgctaaacaagccaccgcagcagtaatgattactatggatgacaccactgtgttg
gtcacggtagtcggtcaaaaatcaacagttgttggacgtgatttcttcccaatgacggtg
gattatcaagaaaagttctacgcagctggtcgtattcccggtggtttcttcaagcgcgaa
gcgcgtgcaacggaagaagaaaccttggttgcacgtctgattgaccgtccattacgcccg
ctgttcccggaaggctttaccaatgaagtgcaattgattgcgactgtggtttccatgaac
gctgatgttagcgcggatattccggcaatgttgggttcttctgcggtaatggctttatca
ggtatgccattccaagggccgattggcgcagcacgtgtgggctatcgcaatggcgaatac
atgctgaacccttctaaagaagacttgaaaacgtcagcgttggatttggtgatcgcgggc
actgatagtgcagtattgatggttgaatccgaagcggatgaactcagcgaagaagtcatg
ctgggtgcggtaatgttcggtcacgagcaaatgcaggtagcgattcaggcgattaaagaa
ttagcggctgaagttggcaatccggcatgggattggacgccaccaaccgcaaacaccgcg
ttagccgatgcagttgcaggtgcttgccaagctgatttggttgaagcgttccaagtggct
gacaagcaaatgcgttatgcgcggattgacgaagttctgagtagcacggttgataagctg
gctgcaaaagacggcgaagaaggtttcagtgctgatgacatcaaggctgaattcaagaat
gtggaaaaaaccgtagtgcgtggcagtattttagatggcaagccacgtattgatgggcgt
gatctgcaaaccgtgcgtccgatcagcgtgcgtctgggcgtattaccacgcgctcacggt
tctgctttgtttacccgtggtgaaacacaggcattggtggttaccaccttgggtactgag
cgtgatgctcaggtgattgatgcaattaccggtgaatacaaagataacttcttgtttaac
tataacttcccgccgtacagcgtcggtgaaactgggcgtttcggttcaccgaagcgtcgt
gaaatcggtcacgggcgtttggccaagcgcggcgttaaagcgatgattccgcacactgat
gatttcccttacaccattcgttgcgtttcagaaatcactgaatctaacggttccagttca
atggcgagcgtctgtggtagttctttgtcattgatggatgcgggcgtgccgattaaatca
ccggttgcgggtatcgcaatgggcttgattaaagaaggtgagcgtttcgcagtattgacc
gacatcttgggcgatgaagatcacctcggtgatatggatttcaaagtggcaggttctgct
gaaggcattaccgcgttgcaaatggacatcaagatcactggcatcaccaaggaaatcatg
caacaagcgttggtacaagcgcaagcaggtcgtttgtatatcttgggtgaaatggcgaaa
ggtctggaagcaccacgcgatgatatttccgaatacgccccgcgttacgtcaccatgaaa
atcaacccggacaaaatccgtgaagtgattggtaagggcggtgaaaccatccgtggcatt
accgaaaaaaccggcgcacaggtcaatatcgacgacgagggtttcatcaaaatcgcggca
gttgacgcgaaagcagcgtatgaagcacgtaccatgatcgaggcgattaccgctgaagtt
gaaattaacaaagtttacaacggtacagtcgcacgcattatggacttcggcgcgttcgtt
accattttgccgggcaaagacggtttgctgcatatttctcaaatcagcaatgagcgcgtg
gaaaatgtcactgactttgtaaatgttggcgataccgtgcaggttaaggttattgaaatc
gaccgccaaggtcggatgcgcttaagcatgaaagacgcaaccggtgagtaa
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