Thermus antranikianii: KNN15_01580
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Entry
KNN15_01580 CDS
T07371
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tant
Thermus antranikianii
Pathway
tant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KNN15_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tant03019
]
KNN15_01580
03009 Ribosome biogenesis [BR:
tant03009
]
KNN15_01580
Enzymes [BR:
tant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KNN15_01580
Messenger RNA biogenesis [BR:
tant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KNN15_01580
Ribosome biogenesis [BR:
tant03009
]
Prokaryotic type
rRNA helicases
KNN15_01580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Hera_RBD
Hera_DD
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QWK22201
LinkDB
All DBs
Position
complement(299663..301228)
Genome browser
AA seq
521 aa
AA seq
DB search
MEFKDFPLKDEIKEALLRRGITAPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIA
QGLEASKERGRLPRALVLTPTRELALQVSGELQAVAPHLKVVTVYGGTGYGKQKEELTRG
CDVVVATPGRALDYLRQGVLDLSRVQIAVLDEADEMLSMGFEEEVEAILSATPKERQTLL
FSATLPSWAKKLAERYMKSPVVINVVREEGITYQEEAIPAPGDRLSLLSDVLFVKAPKRA
IVFTRTKAETEEVATGLLRLGHPARAIHGDLSQTDRERVMRAFREGEVRVLVATDVAARG
LDIPEVDLVVHYRFPDKPETYQHRSGRTGRAGRGGEVVILYGPRERRELSELERAVGRTL
KRVNPPTPEEVLEAKWHHLLARLARVPERDYKLYQDFASRLFAEGRVEVVAALMALLLGG
APKEKSLLTGEEGWLTFKATGPRLTLPRLVALLKEAGLEVGKIAQGEEGFYVDLRPQDLP
RLSEVQGVKLERAKRVEVLPEAYAGAASRGGSPRGRRTSRF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaagactttcccctgaaggacgagattaaggaagctcttttgcgccggggt
atcaccgcccccacccccatccaggcggcggccttgcccctggccctcgagggcaaggac
ctcatcggccaggcccgcacgggcaccggcaagaccctagcctttgccctgcccatcgcg
caaggcctcgaggcctccaaggagcggggccgcctccccagggccttggtgctgaccccc
acccgggagctggccctccaggtttccggggagttgcaggcggtggccccccacctcaag
gtggtcacggtgtacgggggcacgggctacggcaagcagaaggaggagcttacccggggg
tgcgatgtggtggtggccaccccggggcgggccctggattacctgaggcaaggggtgttg
gacctttcccgggtacagatcgctgtcttggacgaggccgatgagatgctctccatgggc
tttgaggaggaggtggaggccatcctctccgccacccccaaggagcgccagacccttctc
ttctccgccaccctgccctcttgggccaagaagctggcggagcggtacatgaaaagcccg
gtggtcatcaacgtggtgcgggaggagggcatcacctaccaggaggaggctattcccgcc
cctggggaccgcctttccctcctgtccgatgtcctttttgtcaaagcccccaagcgggcc
atcgttttcacccgcaccaaggcggaaaccgaggaggtggccacggggcttcttcgcctc
gggcacccggcgcgggccatccacggggatctttcccagacggaccgggaaagggtcatg
agggcctttcgggaaggggaagtaagggttctggtggccacggatgtggccgcccggggc
ctggatatcccggaggtggacctggtggtgcactaccgcttccccgacaagccggagacc
taccagcaccgttcggggcgcacgggcagggccgggcgggggggtgaggtggtgatcctc
tacggcccccgggaaaggcgggagctttccgagctggaaagggccgtgggccgcaccctc
aagcgggtgaatccccccacgcccgaggaagtcctcgaggccaagtggcaccatctcctg
gcccgtctggcccgggtacccgagagggactacaagctgtaccaggatttcgccagccgt
ctgttcgccgaggggcgggtggaggtggtggcggccctcatggcccttctcctgggcggg
gcacccaaggagaaaagccttcttaccggcgaggagggctggcttaccttcaaggccacg
gggcccaggctcaccctgccccggctggtggccctcttgaaggaagcgggcctcgaggtg
ggcaagatcgcccagggagaggagggcttttacgtggacctccgcccccaggacctgccg
aggctttccgaggtgcagggggtgaagctggaaagggctaagcgggtggaggttctccct
gaagcctatgcgggtgctgcctcccgggggggatcgcctcgaggccgccgcaccagccgc
ttctaa
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