Thermus antranikianii: KNN15_06340
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Entry
KNN15_06340 CDS
T07371
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tant
Thermus antranikianii
Pathway
tant03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tant00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KNN15_06340 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tant03021
]
KNN15_06340 (rpoC)
03400 DNA repair and recombination proteins [BR:
tant03400
]
KNN15_06340 (rpoC)
Enzymes [BR:
tant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KNN15_06340 (rpoC)
Transcription machinery [BR:
tant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KNN15_06340 (rpoC)
DNA repair and recombination proteins [BR:
tant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KNN15_06340 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RPOC_hybrid
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
QWK23051
LinkDB
All DBs
Position
1146594..1151171
Genome browser
AA seq
1525 aa
AA seq
DB search
MKKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPTKDYECAC
GKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSA
TELEQVLYFSKYIVLDPKGAVLDGVPVQKRQLLTDEEYRELRYGKQETYPLPQGVDALVK
DGEEVVKGQELAPGVVSRMDGVALYRFPRRVRIDYLRKERAGLRLPLSAWVEREGYRPGE
ILAELPEPYLFRSEEEGVVELKELEEGHLLTLLKDEEAVARYFLPVGLTPLVVHGEVVEK
GQPLAEGRGLLRMPRHMTAKEVEAEEEGDTVYLTFFLEWTEPKDYAVAPHMNVVVPEGAR
VQAGEKVVAAIDPEEEVIAEAEGIVHLHEPASIVVMKARLYPFEEDVEVTTGDRVAPGDV
LADGGRVRSEIYGRVEVDLVRNVVRVVESYDIDARMGAEAIQALLKELDLEKLEAELLEE
MKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDL
NDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDAVIDNGRRGSPVTNPGSERPL
RSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKK
MEEKGIAPNIKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVL
VEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAK
PSRDIILGLYYITQVRREKKGAGREFATVEEALAAYDRGEVALNAPIKVAGKETSVGRLK
FIFSNPDEALLAVAHGFLDLQDVVTVRYLGKRLETSPGRVLFARIVGEAVGDEKVAQELI
QMDVPQEKNSLKDLVYQSFLRLGVEKTARLLDALKYYGFTFSTTSGITIGIDDAIIPPEK
QKYLEEADRKLRQIEQAYEMGFLTDRERYDQVIQLWTETTEKVTQAVFKNFEENYPFNPL
YVMAQSGARGNPQQIRQLCGMRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKG
GADTALRTADSGYLTRKVVDVAHEIVVREADCGTTNFISVPLFQPDEVTRTLRLRKRSDI
ESGLYGRVLARDVEVLGQRLEEGHYLTLEDVGLIIKAAEAEEIKEVPVRSPLTCQTRYGV
CQKCYGYDLSMARPVSIGEAVGVVAAESIGEPGTQLTMRTFHTGGVAVGTDITQGLPRVI
ELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFSKEYKLPKDARLVVKDGDYVE
AGQPLTRGAVDPHQLLEAKGPEAVERYLVDEIQKVYRAQGVKLHDKHIEIVVRQMLKYVE
VTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASF
QNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGNDFVRFTQVVDKKTLKAIEEARK
EAVEAKEKEPALRRPGRREQPGKQA
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaagttcgcaaggtccgcatcgccctggcttctccggaaaagatccgttcc
tggagctacggggaggtggagaagcccgaaaccatcaactaccgcaccctgaagcccgag
cgggatgggcttttcgacgagcgcatcttcggccccaccaaggactacgagtgcgcctgc
ggcaagtacaagcgccagcgctttgagggcaaggtgtgcgagcgctgcggggtggaggtc
accaagagcatcgtgcgccgctaccgcatggggcacatcgagctggccaccccggcggcc
cacatctggttcgtgaaggatgtgccctccaagatcggcaccctcctggacctctccgcc
accgagctggagcaggtcctgtacttcagcaagtacatcgtcctggaccccaagggggcg
gtgctggatggggtgccggtgcagaagcgccagctcctcacggacgaggagtaccgggag
ctccgctacggcaagcaggaaacttaccccctgccccaaggggtggatgccctggtcaag
gacggggaggaggtggtgaaggggcaggagctcgcccccggggtggtgagccgcatggat
ggggtggccctctaccgcttcccccggcgggtgcggatcgactacctgcgcaaggagcgg
gcgggcctccgccttcccctttccgcctgggtggagagggagggctataggccgggagag
atcctggcggaactccccgagccctacctcttccggtcggaggaggagggggtggtggag
cttaaggagctcgaggagggccacctcctcaccctcctcaaggacgaggaggccgtggcc
cgctacttcctgcccgtggggttgacccccttggtggtccacggggaggtggtggagaag
ggccagcccctggccgaggggcggggtcttttgcgcatgcctcgccacatgaccgccaag
gaggtggaggcggaggaggaaggggataccgtctacctcaccttcttcctggagtggacg
gaacccaaggactatgcggtggccccccacatgaacgtggtggtgccggagggggcccgt
gtccaggcgggggagaaggtggtggcggccatcgaccccgaggaggaggtgatcgccgag
gccgagggcatcgttcacctgcacgagcctgccagcattgtggtgatgaaggcccgcctc
tacccctttgaggaggacgtggaggtgaccactggggaccgggtggcccccggggatgtc
ctggccgacggcggcagggtcaggagcgagatctacggccgggtggaggtggacctggtc
cggaacgtggtgcgggtggtggaatcctacgacatcgacgcccgcatgggggctgaggcc
atccaggcccttttgaaggagctggacctggagaagctggaggccgagctcttggaggag
atgaagcacccctcccgggcccggcgggccaaggccaggaagcgcctcgaggtggtccgg
gccttcctggactccggcaaccgcccggagtggatgatcctcgaggcggtgcccgtgctt
ccccccgacctccgccccatggtccaggtggacggcggccgcttcgccaccagcgacctc
aacgacctctaccgccgcctcatcaaccgcaacaaccgcttgaagaagctcctggcccag
ggagccccggagatcatcatccgcaacgagaagcgcatgctccaggaggcggtggatgcg
gtcatcgacaacggccgccgcggctcccccgttaccaacccgggctccgaacggcctctt
aggagcctcaccgacatcctctccggcaagcaaggccgcttccgccagaaccttttgggc
aagcgggtggactactcggggcggagcgtgatcgtggtgggtccccagctcaagctccac
cagtgcggcctgcccaagcgcatggccctggagctcttcaagcccttcctcctcaagaag
atggaggaaaagggcattgcccccaacatcaaggcggcccgcaggatgctggaaaggcag
cgggacatcaaggatgaggtgtgggacgcccttgaggaggtcatccacggcaaggtggtc
ctcttaaaccgcgctcccaccctccaccgcctgggcatccaggccttccagccggttttg
gtggaaggccagtccatccagctccaccccctggtctgcgaggcctttaacgccgacttc
gacggggaccagatggcggtgcacgtgcccctttcctccttcgcccaggcggaggcccgc
atccagatgctctccgcccacaacctcctctccccggcctccggggagcctttggccaag
cccagccgggacatcatcctggggctttactacatcacccaggtgcgccgggagaagaag
ggggcgggccgggagttcgccacggtggaggaggccctggctgcctacgaccggggcgag
gtggccttgaacgcccccatcaaggtggcgggcaaggagaccagcgtgggccgcttgaag
ttcatcttttccaaccctgacgaggcccttttggcggtggcccatggtttcctggacttg
caggatgtggtcacggtgcgctacctgggcaagcgcctggaaaccagcccaggccgggtc
ctcttcgcccgcatcgtgggcgaggcggtgggggacgagaaggtggcccaggagcttatc
cagatggatgtgccccaggagaagaactccttgaaggacctggtctaccagtccttcttg
cgcctaggggtcgagaagaccgcaaggcttttggatgccctcaagtactacggctttacc
ttttccaccaccagcgggatcaccatcggcatcgacgacgccatcattccccccgagaag
cagaagtacctggaggaagccgacaggaagcttaggcagatcgagcaggcctacgagatg
ggcttcctcaccgaccgggagcgttacgaccaggtgatccagctctggaccgaaaccacg
gagaaggtcacccaggccgttttcaagaactttgaggagaactaccccttcaaccccctc
tatgtgatggcccagtccggggcccggggtaacccccagcagatccgccagctttgcggt
atgcggggcctcatgcaaaagccctcgggggagaccttcgaggtgccggtgcgctcctcc
ttccgggaaggcctcaccgtgctggagtacttcatctccagccacggggcccggaagggt
ggagcggacaccgcccttaggaccgcggactcgggctacctcacccggaaggtggtggac
gtggcccacgagatcgtggtgcgggaggcggactgcggcaccaccaactttatctccgtc
cccctcttccagcccgacgaggtgacccgcaccctgcgcctcaggaagcgctcggacatt
gagtccggcctctatggccgcgttctggcccgggatgtggaggttctgggccaacgcttg
gaggaagggcactacctgaccctcgaggacgtggggctcatcatcaaggcggcggaggcc
gaggagatcaaggaggtgcccgtgcgtagccccctcacctgccagacccgctacggggtg
tgccagaagtgctacggctacgacctctccatggccaggcccgtgtccatcggggaagcg
gtgggggtggtggcggcggagtccatcggcgagcccggcacccagctcaccatgcgcacc
ttccacacgggcggcgtggcggtgggcaccgacatcacccagggtctgccccgggtcatc
gagctctttgaggcccgcaggcccaaggctaaggcggtgatctccgagatcgacggggtg
gtgcgcatcgaggaaaccgaggagaagctttccgtcttcgtggaatccgagggcttctcc
aaggagtacaagcttcccaaggatgcccgcttggtggtgaaggatggggattacgtggag
gcgggccagcctttgacccgcggggccgtggatccccaccagcttctggaggccaagggc
cccgaggcggtggagcgctacctggtggacgagatccagaaggtctaccgggcccagggg
gtgaagctccacgacaagcacatcgagatcgtggtgcggcagatgctcaagtacgtggag
gtcaccgatcccggggatagccgcctgctggagggccaggtcctggagaagtgggacgtg
gaggccctgaacgagcggctcatcgccgagggcaagaccccggtggcctggaagcccctc
ctcatgggggtcaccaagagcgccctctccaccaagagctggctttccgccgccagcttc
cagaacaccacccatgtgctcaccgaggcggccatcgccggcaagaaggacgagctcatc
ggtctcaaggaaaacgtcatcttgggccgcctgatccctgcggggaccggaaacgacttc
gtgcgctttacccaggtggtggacaagaagaccctcaaggccatcgaggaagccaggaag
gaggcggtggaggccaaggagaaggagcctgccctccgccgccctggccgccgcgagcag
cctgggaagcaagcctaa
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