KEGG   Thermus antranikianii: KNN15_09835
Entry
KNN15_09835       CDS       T07371                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tant  Thermus antranikianii
Pathway
tant03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tant00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KNN15_09835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tant03019]
    KNN15_09835
Messenger RNA biogenesis [BR:tant03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KNN15_09835
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QWK21325
LinkDB
Position
complement(1798988..1800718)
AA seq 576 aa
MENQERKPRKRRRRRPSDAAPPGLGEGKDYVEIIPLGGMGEIGKNITVFRFRDEIFVLDG
GLAFPDEAMPGVDLLIPRVDYLIENRHLIKAWILTHGHEDHIGGLPFILPMVFGKESQVP
IYGAKLTLGLLKGKLEEFGLRPGSFNLKEISPDDRISVGRYFTLDLFRMTHSIPDNSGLV
IRTPVGTIVHTGDFKLDATPIDGKLSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEME
IAKELDRVIGRAPGRVFVTTFASHIHRIQAVIWAAEKYGRKVAMEGRSMVRFSRIAMELG
YLKVKDRLYTLEEVKDLPDHQVLILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSS
SPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHG
EVRHQTNFKWLAESMSRPPEKTLIGENGAIYRLTRDTFEKVGQVPSGVLYVDGLGVGDIT
EEILADRQHMAEEGIVVITALASQDPVVEVVSRGFVKAGERLLGEVKRMALEALQNGVRE
KKSLERIRDDIYFPVKKFLKKATGRDPMILPVVIEG
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggaaaaccaagaacgcaagccaaggaaaagacggcgcagaaggccatcggacgccgct
cccccaggccttggagagggtaaggactacgtggagatcattcccctaggggggatgggg
gagatcggcaagaacatcaccgtcttccgcttccgggacgagattttcgtgctggacggg
gggcttgccttccccgacgaggccatgcccggggtggacctcctcatcccccgggtggac
tacctcatcgaaaaccggcacctcatcaaggcttggatcctgacccacggacacgaggac
cacatcggggggcttcccttcatcctccccatggtcttcgggaaggaaagccaggtgccc
atctacggggccaagcttaccctgggcctcctaaaggggaagctggaggagttcggtttg
aggccggggagcttcaacctcaaggagatctcccccgatgaccgcatcagcgtggggcgc
tacttcaccctggacctcttccgcatgacccactccatccccgataactccgggctggtc
atccgcacccccgtcggcaccatcgtgcacaccggggacttcaagctggacgccaccccc
atagacggtaaactctcccacctggccaaggtggcccaggcgggggcggaaggggtctta
ctcctcatcgccgactccaccaacgccgagcgccccggctacaccccgagcgagatggag
atcgccaaggaactggaccgggtcatcggccgggccccgggcagggtcttcgtcaccacc
ttcgccagccacatccaccgcatccaggcggtgatctgggcggcggagaagtatgggcgc
aaggtggccatggaggggcggagcatggtgcggttcagccgcatcgccatggagctgggc
tacctcaaggtgaaggaccgcctctacaccctggaggaggtcaaggacctccccgaccac
caggtgctgatcctggccacgggaagccaggggcagcccatgtccgtcctccaccgcctg
gcctttgaaggccacgccaagatggccatcaagcccggggacacggtgatcctctccagc
agccccatccccggcaacgaggaggcggtgaaccgggtcatcaaccggctctacgccctg
ggggcttacgtcctctacccccctacctacaaggttcacgcctcggggcacgcctcccaa
gaggagctcaagctcatcctgaacctcaccaccccccgtttcttcctcccctggcacggg
gaggtgcgccaccagaccaacttcaagtggctggcggagtccatgagccgtcccccggag
aaaaccctcatcggggagaacggggccatctaccgcctaacccgggacacctttgagaag
gtaggccaggtgccctctggggtcctctatgtggacggcctgggggttggggacatcacc
gaggagatcctggccgaccgccagcacatggccgaggaggggatcgtggtcatcaccgcc
ctagcgagccaggacccggtggtggaggtggtgtcccgggggtttgtcaaggccggggag
cggctcttgggcgaggtgaagcgcatggccctcgaggccctgcaaaacggggtgcgggag
aagaaatccttggaacgtatccgggacgacatctacttcccggtgaaaaagttcctgaag
aaggccacgggccgggatcccatgatccttcccgtggtcatcgaggggtga

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