Thiomicrospira aerophila: THIAE_00875
Help
Entry
THIAE_00875 CDS
T03589
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THIAE_00875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tao03021
]
THIAE_00875
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_00875
Enzymes [BR:
tao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THIAE_00875
Transcription machinery [BR:
tao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THIAE_00875
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THIAE_00875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AHF00497
UniProt:
W0DPW1
LinkDB
All DBs
Position
179247..180233
Genome browser
AA seq
328 aa
AA seq
DB search
MQEMLEQLLTPRLVDIKRISSTHSRVTLEPLERGFGHTLGNALRRILLSSMPGAAISEVQ
IDGVLHEYSTIEGVREDVLEILLNLKEVSVKLNARQSSEMTLSMTGPAVVRAKDIQVDHD
TEICNPDLVIAHLGDGAKLVMTLKVEKGIGYSAATQNEQAAGTVGFLRLDASFSPVHTVS
YSVENARVEQRTDLDKLILDVVTNGTLDPEDAIKQAATVLHYQLNAFVDLKHQEVEAPQE
EENDYDPIFLQPVDDLELTVRSANCLKAEQIYYIGDLVQRTEAHLLKTPNLGKKSLQEIK
DVLAQRGLGLGTKLDNWPPSSLVGKESA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagatgttagaacaattgttaaccccgcgtcttgttgacatcaaaagaatcagt
tcaacgcatagtcgtgtaacactagaaccactagaacgtggttttggtcacacgctaggc
aatgcactaagacgtatattattgtcgtcaatgcctggtgctgctataagcgaggttcag
attgatggtgtattgcatgaatactcaactattgagggtgttcgtgaggatgtacttgag
attctattaaaccttaaagaagtgtcagttaagttgaatgctcgtcagtctagtgagatg
actttgtctatgacaggtcctgctgttgtgcgtgctaaagacattcaggtagaccatgat
actgaaatttgtaatccagatttagtgattgcacatcttggagatggcgctaaattagtg
atgacgttgaaggttgagaagggtattggttactctgctgcaactcagaacgagcaggct
gcaggtactgttgggttcttgcgtcttgatgcaagttttagcccggttcatacggttagt
tattcggttgagaatgcacgtgttgagcagcgtaccgatttagacaaactgattttagat
gtcgttactaatggtactttggatcccgaagatgctattaaacaagctgcaacagtttta
cactatcagcttaatgcgtttgtcgatttaaaacaccaagaagttgaggctccacaggaa
gaagagaatgattacgatccaatcttcttacagcctgttgatgatcttgaattaactgtt
cgttcagcaaattgtttgaaagcagaacagatttactacattggtgatttggtacaacgt
actgaagcgcatttattaaaaacgccaaaccttggtaaaaagtcattacaagaaatcaaa
gatgttcttgctcagcgtggcttaggtttgggtactaaattagacaattggccaccatca
agtttggtgggtaaagagtcagcgtaa
DBGET
integrated database retrieval system
