Thiomicrospira aerophila: THIAE_00970
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Entry
THIAE_00970 CDS
T03589
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_00970
Enzymes [BR:
tao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THIAE_00970
DNA repair and recombination proteins [BR:
tao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THIAE_00970
Prokaryotic type
THIAE_00970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHF00516
UniProt:
W0DUF9
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All DBs
Position
197841..199412
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AA seq
523 aa
AA seq
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MDRPANQSKPRVQLVWFKRDLRIHDHAPLYFAAQQGAVLPVYVFEPVLWQQPDASLRQWR
FVADCLLDLDADLRALGQGLVFAVGEVTDLFAQLQQDYQISAIWSHQETGNAWSYQRDKQ
VKAWLKDQQIPWYELAQHPIKRGPAQRDHWQAQAEQFFQQAFIPAPASLSGLLMAPPLTA
NGLAQQLEDHLPRPIVPDEQTQPGGRRRGEQRLADFLQRHLSRYLYDIAKPLAARQSSSR
LSPHLAWGSLSIREVMQAAYSARGKLGEKNGRALSAFVSRLHWQSHFMQKLETEPALEFN
CLQAETEGLRSQGQYPTRLQAWFEGQTGVPLVDACMRCLRHTGWLPFRMRAMVMSFASYQ
LWLDWRDTAPLLARLFTDYEPGIHYSQVQMQSGTTGINAMRVYNPVKQSQDHDPEGRFIK
QWCPELAGLEAAFIHAPWDAAPEWLAQAGLVLGQDYPWPIVDLEQSAREAKQQLAALRKQ
PSARAQAQQVYVKHGSRLRPASRRRSKKIASAREADSPQLSLF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatcggccggctaatcaaagcaagccaagggtacaactggtctggtttaagcgtgat
ttgcgtatccatgatcatgcgccgctgtattttgccgcccagcagggcgcggtcttacct
gtctatgttttcgagccagtgctttggcaacagccggatgccagtttgcgccaatggcga
tttgtcgcggattgtttgctggacttggatgcggacttacgtgcgttgggtcaaggcttg
gtgtttgcggttggcgaggtgaccgacctatttgcgcagcttcaacaggattatcagatc
agcgcgatctggtcgcatcaagaaaccggcaatgcctggagctatcaacgcgataagcag
gttaaagcttggttaaaagatcaacagattccttggtatgaattagcccagcatccgata
aaacgtggcccagcacaacgagatcattggcaggctcaagccgaacagttttttcaacaa
gccttcatccccgcaccggccagcttatcaggcctgctgatggcgccgccgttaactgcc
aacgggctggcccagcagcttgaagatcatttgccgagaccgattgtgcccgatgagcag
actcagccgggcgggcggcgacgcggcgagcaacgcttggccgattttctgcagcgccat
ctatcgcgttatttgtatgacattgccaagccgttggctgcccgacaatccagttcacgg
ctcagcccacatttagcttggggcagtctgtcgattcgtgaggtgatgcaagccgcctac
agcgcgcgaggcaagttgggcgaaaaaaatggccgcgccttaagtgctttcgtgtcacgg
cttcactggcaaagccattttatgcaaaaactggaaaccgagccggcactggagtttaac
tgtttgcaagctgaaacagaggggctgcgaagccaaggtcagtatccgacacgtttgcag
gcttggtttgaaggacaaactggcgtgccgttggtcgatgcgtgtatgcgttgcttgcgc
cataccggttggttaccgtttcggatgcgggcgatggtgatgagttttgccagttatcag
ctttggctagattggcgcgatacagcaccattgctggcgcgtttgttcactgattatgaa
ccgggcattcattactcgcaggtacaaatgcaatccggcaccaccgggattaatgcgatg
cgggtgtataacccggttaagcagtcacaagaccatgaccctgaaggtcgttttatcaag
cagtggtgtcctgaactggccggtttagaggccgcgtttattcacgcaccttgggatgcg
gcgccggaatggttggcacaagcaggcctggtgttggggcaagattatccctggccgatt
gttgatcttgagcagtcagcgcgtgaggcaaaacaacagcttgccgcgttacgcaagcaa
ccgagtgctcgtgcacaagcgcagcaagtttatgttaagcatggtagccgcttgcgtccg
gccagtcggcgtaggtctaaaaaaattgccagcgctcgtgaagctgatagtccacaattg
agtttgttttaa
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