Thiomicrospira aerophila: THIAE_04145
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Entry
THIAE_04145 CDS
T03589
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao00541
Biosynthesis of various nucleotide sugars
tao01100
Metabolic pathways
tao01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THIAE_04145 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tao01005
]
THIAE_04145 (rfaD)
Enzymes [BR:
tao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
THIAE_04145 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tao01005
]
Core region
THIAE_04145 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AHF01095
UniProt:
W0DR42
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All DBs
Position
866063..867031
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AA seq
322 aa
AA seq
DB search
MIVVTGGAGFIGSNIVKALNAQGRSDIIVVDNLKNGKKFINIADCDIADYLDKEDFQARI
FAEEGLPKIDCIFHEGACSATTEWDGKYVMDNNYEYSKDLLHFCLDRKIPFLYASSAATY
GDGPTFIEDRQYEKPLNVYGYSKFQFDQYVRQILPQAQSQVVGFRYFNVYGPREQHKGDM
ASVAFKLHNQILRGENPKLFGEYDGYGPGMQTRDFVYIEDVVKVNLWFMVNPDKSGIFNL
GPAAAEPFKNVAEAVINFHGKGQIEYIPFPEHLKGAYQSFTQADNTRLRQAGYSDKFHTV
AQGVQKYLSWLTENKHFLDFSR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagtcaccggtggggcagggtttattggcagtaatattgtgaaggcgctgaat
gcacaaggacgcagcgatattattgtggtggataatcttaaaaacggtaaaaagtttatc
aatattgccgattgcgatatcgctgactatctggataaagaagactttcaagcgcgtatt
tttgccgaagaagggctgccaaagattgactgtattttccatgaaggcgcgtgttcggcc
accaccgaatgggacggcaaatatgttatggataataactacgaatactccaaagacctg
ttgcatttttgtttagaccgcaaaatcccgtttctgtatgcatcttcagcggctacctat
ggtgatggcccgacttttattgaagaccgacaatatgaaaagccgctcaatgtatatggt
tactcaaagtttcagtttgaccaatatgtgcgccaaattctgccccaagcgcaaagccaa
gtggttgggtttcgttatttcaatgtctatgggccgcgtgaacaacacaaaggcgatatg
gccagtgtcgcatttaaactgcataaccaaattctgcgcggtgaaaatcctaaactgttt
ggcgagtacgatggctatggcccgggcatgcaaacccgcgactttgtctatatcgaagac
gtggtgaaggtcaatttatggtttatggtaaaccctgataaatccggcatttttaatctc
ggtcctgccgcagccgagccgtttaaaaacgtggccgaagccgtcatcaattttcacggc
aaagggcagattgaatatattccgttcccggaacacttaaagggtgcctatcaaagcttt
actcaagccgacaatacgcgtttgcgccaggccggttatagcgacaaatttcacaccgta
gcgcaaggggtgcaaaaatacctcagctggctaacggaaaataaacatttcttagatttt
agtcgatga
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