Thiomicrospira aerophila: THIAE_04485
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Entry
THIAE_04485 CDS
T03589
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tao03019
]
THIAE_04485 (rnc)
03009 Ribosome biogenesis [BR:
tao03009
]
THIAE_04485 (rnc)
03036 Chromosome and associated proteins [BR:
tao03036
]
THIAE_04485 (rnc)
Enzymes [BR:
tao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
THIAE_04485 (rnc)
Messenger RNA biogenesis [BR:
tao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THIAE_04485 (rnc)
Ribosome biogenesis [BR:
tao03009
]
Eukaryotic type
90S particles
RNase
THIAE_04485 (rnc)
Prokaryotic type
rRNA processing factors
THIAE_04485 (rnc)
Chromosome and associated proteins [BR:
tao03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
THIAE_04485 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHF01141
UniProt:
W0DW86
LinkDB
All DBs
Position
922024..922719
Genome browser
AA seq
231 aa
AA seq
DB search
MADQAERQFKLRQLSARLGYEFQDESWLELALTHRSAGAKNNERLEFLGDSLVNFMVADL
LFEQFKNLPEGDLSRIRAHLVKGETLAKLAKKLALSDMLTLGPGELKSGGYRRESILADA
LEAIIAAIYQDGGLQACRGFVESLYAKSLHALDPQTVGKDPKTRLQEWLQAQQQPLPEYS
IISVNGAAHAQVFTVACYVAPLNTKFEATDTSRRKAEQKAAEIALEALGQV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagctgaacgccaatttaaattacgccaattatcggcccgtttaggttac
gagtttcaagatgaatcctggttggagcttgccttaactcaccgcagcgctggcgctaaa
aataatgagcgtttggagtttttgggagatagtttggtcaacttcatggtcgcggatttg
ctatttgagcaatttaagaatttgcctgaaggcgatttaagccggattcgtgcccattta
gtaaagggtgaaaccctcgctaagctggccaagaaattagccttaagtgatatgctgaca
ttgggaccgggagagttaaaaagcggcggctatcgtcgtgagtctattttagccgatgca
cttgaagcgattattgccgcgatttatcaggatggtggcttgcaggcgtgccgtggtttt
gttgagtcgctttatgctaaaagcctgcatgcgcttgacccgcaaaccgtgggcaaggat
cctaaaacccgcttgcaagagtggttgcaagcccaacagcagcctttgccagaatacagt
attattagtgtcaatggcgccgcgcatgctcaggtatttactgtggcctgttatgttgcg
ccccttaatactaaatttgaagcgactgacaccagtcgacgaaaagcggaacaaaaagcc
gctgaaattgcgcttgaagcgctaggacaagtatga
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