Thiomicrospira aerophila: THIAE_04600
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Entry
THIAE_04600 CDS
T03589
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tao03016
]
THIAE_04600
Enzymes [BR:
tao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THIAE_04600
Transfer RNA biogenesis [BR:
tao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THIAE_04600
Prokaryotic type
THIAE_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHF01163
UniProt:
W0DV85
LinkDB
All DBs
Position
945595..946551
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AA seq
318 aa
AA seq
DB search
MSNSRQRRRVVNGIVLVDKPVGMTSTEVVKQVVKAYRAKKAGHSGTLDPFATGLLPVCLG
EATKVSSMLLASDKRYIATLDLGQKTDTGDHDGEVIESLPVPDLTAEMIEQVLASFRGEI
AQVPPMYSSIKFEGKSLHVYARKGIEIEREPRNVTIHELKLLDFNVAQIRFEVHCSKGTY
IRVLGAEIAEALGTVGHLTALHRTQTGIFHAKDMRPLHEICTYPNSSIHPLDIALLEYPA
LYLTAAQKEHLWLGGFLFDLLPEQTDVTHMIRLYDDQGMVFAMGEWQADKQRLKIKRGFH
LNPDDPNALCATQPRLDS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattctagacagcgtcgccgtgtcgtcaacggtatcgtgttagttgataaacct
gtgggtatgacctcaaccgaggtggtcaagcaggttgtcaaagcctatcgtgctaaaaaa
gctggccactccggtacgcttgatccttttgcaaccggattattgccggtgtgtttaggc
gaggcgaccaaagtatctagcatgttattagcttcggacaaacgttatattgcgacgctt
gacttaggtcaaaaaaccgataccggcgatcatgatggtgaggtgattgaaagcttgcct
gtgcccgatttaaccgctgagatgattgagcaggtgcttgcatcctttcggggtgagatt
gcgcaggtgccgcctatgtattcatcgatcaaatttgaaggtaagtctttgcatgtctat
gcgcgtaaaggcatagagattgaacgagaaccgcgtaacgtcacgattcacgagctaaaa
ttacttgatttcaacgtcgcgcaaattcgttttgaggtgcattgttcaaaaggaacctac
attcgcgtattgggggctgaaatcgcagaagcccttggcaccgtgggtcatttaacggcc
ttgcaccgcacccaaacgggtatttttcatgcaaaagatatgcgcccgctacatgagatt
tgcacctatcccaattcatcgattcatccgttggatattgcgttgttggagtatccggca
ctctatttaaccgcggctcaaaaagagcatctttggttaggtggctttttatttgaccta
ttgcctgagcaaaccgatgtgactcacatgattcgactttatgacgatcaagggatggtg
tttgcaatgggtgagtggcaggcggataaacaacgtctaaagataaagcggggttttcac
ttaaatcctgatgatcccaatgcgctctgtgccacccagccacgcctcgatagctga
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