Thiomicrospira aerophila: THIAE_05100
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Entry
THIAE_05100 CDS
T03589
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_05100
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THIAE_05100
Archaeal homologous recombinant proteins
THIAE_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHF01255
UniProt:
W0DRM0
LinkDB
All DBs
Position
complement(1048191..1049336)
Genome browser
AA seq
381 aa
AA seq
DB search
MKLLHTADWHLGRVLHHHSLLADQAHVLNQIMDYAVAHQVDAVLVAGDIYDRSMPLADAV
RLLNQTINRFAELAIPLIMISGNHDSAERLGFAATQLHKTGLHILTDIQHVAEPVWLRKA
DTALQIFGIPFADPERVRHVFNQSVTDYDAAHNLLLDQVKAARDPHFPALLMSHCFVDGA
DTSESEKTLSVGGSDRVSYEPMLAFDYVALGHLHSPQSKGASHIRYAGSPLKYSFSEHLH
KKGVTLLSFNSAGLVAQAHLPLQPLREMRVLEGTLNVLLAQGQQDPQRDDYIMVRLTDTT
ALLDPMGRLREVYPNVLHLEKRLLQTEPLAQANPNHIKLDAAQLVRDFYAQIQGEPLTDA
QSDIINATLTKLLQPNQDNSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
attaaacttcttcacactgcagattggcatttaggccgcgtgcttcatcatcattcgtta
ttggctgatcaggcgcatgttttaaaccagattatggattatgccgttgcgcatcaggtc
gatgcggtactggtggcgggtgatatttatgaccgctcgatgccgctcgctgatgcggtg
cgcttgcttaatcaaaccattaaccgttttgccgagttggcgattccgctgattatgatt
agcggtaaccatgatagtgccgagcgcttaggctttgccgccacacaattgcataaaacc
ggcttacatatcctcactgatatccaacatgtagccgagccggtatggctgcgcaaggcc
gacaccgcgctgcaaatctttggcattccttttgccgaccccgagcgagttcggcatgtg
tttaatcagtcggttacggattatgatgccgcccacaatctgctgctagaccaggtgaaa
gccgcgcgtgacccccattttccggcgctgctcatgtcgcattgttttgttgatggcgcg
gatacctctgagtcggaaaaaaccctatcggtcggaggatcggatcgggtgtcttatgag
ccgatgctcgcgtttgattatgtggctttggggcatttacacagtccgcagtcaaagggg
gcgtctcacattcgttatgcgggttcaccgcttaaatacagcttttccgagcatttacat
aaaaaaggcgttaccttgctgtcctttaattcagcaggcctggtggcacaggcgcatttg
ccgttacagcccttgcgtgaaatgcgcgtgctcgaaggcaccttaaatgttttattggcg
caaggtcagcaggatccgcaacgcgacgattacattatggtgcgcttaaccgatacgaca
gccttgcttgatccgatggggcgcttacgcgaagtctatcccaatgtgctgcatctggaa
aaacgcttgttgcaaaccgagccattagcgcaggctaaccccaaccatatcaaacttgat
gccgcgcaactcgttcgcgacttttacgcccaaattcaaggcgaaccgctgacggacgcg
cagtccgacattattaatgccacgctgactaaactcttgcaacccaatcaagataactcg
ctatga
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